Rosa chinensis (China rose): 112191648
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Entry
112191648 CDS
T06020
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112191648
04121 Ubiquitin system [BR:
rcn04121
]
112191648
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112191648
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112191648
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112191648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Zn_ribbon_NOB1
Prok-RING_4
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
112191648
NCBI-ProteinID:
XP_024186799
LinkDB
All DBs
Position
3:12744314..12746109
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AA seq
372 aa
AA seq
DB search
MASMGASYWCYTCSRMIRVRVRAQDSIFCPDCGAGFIEEIQTPTRSPLNHPFPAAAMFLD
STPISQSPSPRLRRSQRSSRDRSPFNPVIVLRGPPDSGAPATETDPGTFELYYDDGAGLG
LRPLPSSMSDFLMGSGFDRLLHQLTQLENGVGRLDHPPASKAAIESMPVIKIEDSHVTTE
SHCAVCKEAFELDSEAREMPCKHIYHNDCIFPWLSIRNSCPVCRHQLPSDVRGGGGSGRP
SLETALIGEEETVGLTIWRLPGGGFAVGRFTGGRRAAERELPVVYTEMDGGFNTAGGAPR
MISLASSGRRTRESGGFARAFRSFFSFFGRLRSSSSRSSSESRLARRSRSSSVFSRSSRR
RNQGWAFEDDEN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatgggcgcctcctactggtgctacacgtgcagccgcatgattcgggtccgg
gtccgggcccaagactcgatcttttgccccgactgcggcgccgggttcatcgaggagatc
cagaccccgacccgatcccctctcaaccacccatttccggccgccgcgatgttcctcgac
agcacgccgatatcgcagagcccgagccccaggctgcggcggagccagaggagcagccgc
gaccgatcccctttcaacccggtgatcgtgctccgcggcccgccggattccggagccccg
gctacggaaaccgacccggggacttttgagctgtactacgacgacggagcggggttgggg
cttcggccgctgccgtcgagcatgtcggatttcttgatggggtcgggtttcgaccggttg
ctccaccagttgacccaattggagaacggggtcggaagattggaccacccgccggcgtcg
aaagccgcgatcgagtcgatgccggtgatcaaaatcgaggacagccacgtcacgacggag
tcgcactgcgcggtgtgtaaggaggcgtttgagcttgattcggaggcgcgtgagatgccc
tgtaagcacatttaccataatgattgtatctttccttggctttcgattcggaattcgtgc
ccggtgtgtcgtcatcagctgccgagtgacgtacgcggcggcggtgggagtggcaggccc
tcactggagactgctctgatcggagaggaagagactgtgggattgactatatggaggtta
ccgggaggcggattcgctgtggggaggttcaccggaggaagaagagcggcggagcgtgag
cttccggtggtgtacactgagatggacggtgggttcaacactgctggtggtgctccgagg
atgatttcgttggcttcgagtggaagaagaacaagggagagtggtggttttgctagagct
tttcgaagtttcttctccttttttgggaggcttaggagctcatcttcaaggtcgagctcg
gagtctcgtttagcaagaagaagtcggagcagtagtgtgttcagtagatcttcacggcgg
cggaatcagggctgggcttttgaagatgatgagaactga
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