Rosa chinensis (China rose): 112191962
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Entry
112191962 CDS
T06020
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
112191962
04980 Cobalamin transport and metabolism
112191962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112191962
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112191962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
TMEM237
Motif
Other DBs
NCBI-GeneID:
112191962
NCBI-ProteinID:
XP_024187235
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All DBs
Position
3:10628548..10633455
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AA seq
508 aa
AA seq
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MGDFNLALVIVAIILVVVVFIFNVYLLVNYQHPDDKNQAYFPKFVVVLGLSVAAISILML
PADVANRQACRHAIYNGACNLTLPMKDLWLAVYILDAVLVFLIIPFAMFYYEGDQDKTVG
KRIGSAMLWVGVSAVVCGLVLGILYGLVGKVDFTVRHLSSSTAAFPSSFSYSSGEPCISG
SKQCAAYTANAASEKTWTMRTTFPEYAVALITIVGSVLFTIFGGVGIACLPLSLIFAFVR
RPKAVITRSQYIKEATELGKKAKELKKAADALHQEERSGSKGRKWRKNVKAVEKELLQLE
EDVKLLEEVYPQGEQAETSWAMTVLGYLAKLVLGVLGLIVSVAWVAHIIIYLLISPPLSP
FLNEVFIKLDDIWGLLGTVAFAFFCFYLLIAVIAGAMMLGMKLVFITIHPMKWGATLMNS
FLFNVGLILLSSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIRFLYKYNVFQIAFI
ILAGLTFVYYAAFGWRRKKPSGRFQLSS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttcaacctcgcgctcgtaatcgtcgccattatactggtggtcgtcgtgttc
atcttcaatgtctacctcctcgtcaattaccagcacccggacgacaagaaccaggcctac
tttcccaaattcgtcgtcgttttggggctctccgtcgccgcgatttccattctcatgtta
ccggccgacgtggccaaccggcaggcctgccgccacgcgatatacaatggcgcgtgtaat
ctcactcttccgatgaaggatctctggctcgccgtctatatcctcgacgccgtcctcgtc
ttcctcatcattcccttcgctatgttctactacgaaggcgaccaggacaagactgttgga
aagagaattggaagcgcaatgttgtgggtgggggtaagcgccgttgtgtgtggtctcgtt
ctcggcatcttgtacgggcttgttggaaaggtggactttactgttaggcacctctcttct
tccacagctgcatttcctagttcattttcctattctagcggtgaaccatgtatcagtggc
tcgaaacagtgtgccgcatatactgcaaatgctgcatcagagaaaacatggaccatgcgt
actacctttccagaatatgctgttgctcttattaccattgttggatccgtactttttact
atatttggtggtgttgggattgcttgtctacctctcagtctcatatttgcattcgttcgg
cgtccaaaggctgttattactcggtcacagtatataaaggaagcaaccgaactgggtaag
aaagcaaaagaactgaagaaagcagccgatgcactccatcaagaagaaagaagtggttct
aagggtagaaaatggcgtaaaaatgtaaaggcagtagagaaggagttgcttcaattagaa
gaagatgtaaaacttctagaagaggtgtatcctcaaggagagcaggctgagacttcttgg
gctatgactgttcttggttacttggcaaaactcgtgttgggagttttaggattgattgtt
tcagtggcttgggttgctcatatcatcatatatctattaataagccctccactttctccc
ttcttgaatgaggttttcatcaagctggatgacatatggggtcttttgggcactgttgca
tttgcattcttctgcttttacctcctgattgcagtcattgctggggctatgatgcttgga
atgaaattagttttcattactattcaccccatgaagtggggagccactcttatgaattcg
tttttatttaatgtgggactcattcttctttcctccatcagtgtgattcagttctgctcc
acagcatttgcctactatgctcaagcaactgcagcacaagaaatatttggtcacactttg
gaatctcttcggggaattagatttttgtacaagtacaatgtgttccaaattgcatttatt
atcctggcgggattgacctttgtgtactatgctgccttcggatggagaagaaaaaaacct
agtggcaggttccaactgtcctcgtaa
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