Rosa chinensis (China rose): 112191985
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Entry
112191985 CDS
T06020
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112191985
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112191985
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112191985
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112191985
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112191985
Ion channels [BR:
rcn04040
]
Chloride channels
Chloride channel (CLC)
112191985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
112191985
NCBI-ProteinID:
XP_024187259
LinkDB
All DBs
Position
3:31575979..31583211
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AA seq
781 aa
AA seq
DB search
MDPERNSSCQLLAGVGSDLENFDLLEKETENNENDRTYSYREPLLRKRTNTTSQIAIVGA
NVCPIESLDYEIFENDLFKQDWRSAKKSRILRYVVLKWAFALVIGLVTGLVGFFNNIAVE
NIAGYKLLLTSSFMAKAQYYKAFAVFASINVGLATAAAALCAFIAPAAAGSGIPEVKAYL
NGIDAYSILAPSTLFVKIFGSILCVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTW
SWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAI
VAIVLRGFIQFCATGNCGLFGEGGLIMYDVSAADATYSAPDILAVLLLGVFGGIFGSIYN
YCVDKVIRTYSIIHEKGAAPKILLVITISLLTSSVAYGLPWFARCIACPTDLTVACPTVG
KAGNYISFNCPSGYYNDIASLFLNTNDDAIRNLFSTDTTKEFHIYSLFIFFAAVYILGII
TYGIAIPSGLFIPVILAGACYGRLVGRLFESISSLDTGLFALLGAASFLGGTMRMTVSLC
VILLELTNDLLLLPLVMLVLLISKTVADNFNKGIYDQIVKIKGLPYLEAHAEPYMKHLVA
SDVVSGPLVTFSGVEKVGCILHALRTTGHNGFPVIDEPPFSDTPELCGLVLRSHLLTLLN
GKIFSRERILCREEILSRFGAFDFAKAGSGKGLKVEDLDIDEEEMEMYVDLHPIANASPY
TVVETMSLAKAALLFRQLGLRHLCLVPKSQGRSPIVGILTRHDFMPEHILGLFPNIKPHN
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggatccagaaaggaatagcagctgccaattgcttgctggtgttggtagtgaccttgag
aattttgatttgttggagaaggagactgagaataatgagaacgacaggacatacagctac
agagaaccgcttctgaggaaaaggaccaacacaacatctcagattgccatcgttggtgcc
aatgtctgccccattgagagccttgactatgagatttttgaaaacgatctatttaagcag
gactggaggtcagcaaagaagagtcgaatactgcggtatgtggtgctaaagtgggcattt
gcacttgtcattgggcttgtgactggcctggttggcttcttcaacaatattgcagtcgag
aatattgctggatacaagctgctgttgactagcagtttcatggcaaaggcacaatattac
aaggcttttgcagtatttgcttccataaacgtaggtttagcaacagcggctgcggctctt
tgtgctttcattgctcctgcagcagcaggttctggtattccggaggtcaaagcttattta
aatggaatagatgcatattcaatactggctccaagcactctttttgtcaagatttttggt
tccattctttgtgtttctgccggatttgtggttggtaaagaaggccccatggtacataca
ggtgcttgcatagcctctttgcttgggcaggggggttctcgcaagtatcatttgacctgg
tcgtggctaagatacttcaaaaatgatcgtgaccgacgagacttgatcacatgtggtgct
gcagctggtgtggctgctgcctttcgtgctccagttggcggtgttctctttgcccttgaa
gaagcagcttcatggtggcggagtgctcttctttggagaacctttttcacgacagcaata
gttgcaattgtactgagaggtttcatacagttctgtgctacaggaaactgtggcctattt
ggggaaggcggtctgattatgtatgacgtcagtgcagctgatgcaacatatagtgccccc
gatatactagcagtattactcctcggtgtttttggaggaatttttggaagtatatacaac
tattgtgttgacaaggtcattcgaacttatagcatcattcacgaaaaaggtgctgctccg
aaaatcttacttgttatcaccatttccctattgacgtcatctgttgcttatggcttgcca
tggtttgcaaggtgcattgcatgccctactgatctgactgtcgcttgtcctactgttggg
aaagctggcaactatataagcttcaactgcccatcaggctattacaatgacattgcctcc
ctctttctgaacactaacgatgatgctattcgtaatctatttagcaccgatacaacaaaa
gaattccacatatactctcttttcatcttctttgctgctgtttacatccttggaattatt
acatatggcattgctattccttctggacttttcatccctgtcatactagccggagcttgc
tatggtcgtcttgttgggaggttgtttgaatcaatatctagtctcgacacaggcctcttt
gccctacttggagctgcctcgttccttggtggcactatgcggatgacagtttccctatgc
gtcatattgcttgaacttaccaatgacttactgttgcttcccctggtgatgttggtcctg
cttatttcaaaaaccgtggctgataactttaacaagggaatttatgaccagatagttaag
ataaagggattgccttatttggaggctcatgcagaaccttacatgaagcatttggtcgca
agtgatgttgtttcaggtccactggttaccttttctggtgttgagaaggtaggctgtata
ctgcatgctttgaggaccacagggcataatggattcccagtgattgatgaaccacctttt
tctgacactcctgagttgtgtggtcttgttttaaggtcccatttgcttactttgctcaac
ggtaagatcttttcaagggaaaggattctttgtcgagaagagatcttaagcagatttggt
gcatttgattttgctaaggcgggatcaggaaagggactcaaagtggaagatcttgatatt
gacgaggaagagatggaaatgtatgttgacctccatcctattgcaaatgcatccccatac
acagtggttgagacaatgtcactagccaaagccgctcttctgtttcgacaacttggtctc
aggcacttatgtttggtaccaaagagccaagggagatctccaatcgtcggaattctgaca
cggcatgacttcatgccagagcacattctgggactcttccctaatatcaagcctcacaac
aactag
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