Rosa chinensis (China rose): 112192041
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Entry
112192041 CDS
T06020
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112192041
03015 mRNA surveillance pathway
112192041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112192041
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112192041
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112192041
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Toprim
Motif
Other DBs
NCBI-GeneID:
112192041
NCBI-ProteinID:
XP_040373204
LinkDB
All DBs
Position
3:complement(17195990..17199731)
Genome browser
AA seq
480 aa
AA seq
DB search
MAEKNQNDAVSTPPSSLDLELNIAGLNIGDHKSSICQAELQIAGENKFLDEREDSNISAV
TNGNKPYTSASNFEDLHLSEELLKGLYVEMGFKKPSKIQAITLPMILTTPYKDLVAQAHN
GSGKTTCFVLGMLSRVDQNVKAPQALCICPTRELALQNGEVIRKMGKYTGINVESAVPME
KEKSTPVKYRPLVSAQIVIGTPGTVKNLMSYKKLGVSGVKILVFDEADHMLAEDGFKDDS
LRIKKEIEKFDTHCQVLQFSATFDETVRNFISRVVKDKNELFVKKEELSLAAVKQYKVYC
PDELTKIDVIKTKIFDLGENIGQRIIFVGSKASARMLHKQLHEDGYAVTNVHGALTPEHR
DKTIKEFREGYTQVLIATDMLARGFDSQQVNCVVNYDLPIKYQAWSRKQAAPEPDYEVYL
HRCGRAGRFGRKGAVFNLLCHDSDQQLMGKIEQHYSIQVPEVNISEEAFDDALKLAGLKE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaaaaatcaaaacgacgcagtatctacacctccgtcctctttggatctcgag
cttaacatcgccggcttgaatatcggcgaccacaaatcgtcaatttgccaagctgagctc
caaatcgccggcgagaacaaattcctggacgaacgtgaagactcgaatatcagcgctgtt
acaaacggcaacaagccgtacacgtcggcgagtaatttcgaggatctgcatttatcagag
gagttgttgaagggtttgtatgtggagatggggttcaagaagccgagtaaaatccaggca
attacattgcctatgattttgacgactccatacaaagacttggttgctcaggctcacaat
ggctcagggaagactacttgtttcgtgctcgggatgctcagccgtgtcgatcagaatgtg
aaagctcctcaggctctctgcatttgtcccaccagagaattggcacttcagaatggggag
gttattcgtaagatggggaagtacacagggataaatgtagagagtgctgttccaatggag
aaggaaaaatctacaccagtgaagtaccggcctctggtatcagcacaaattgtgattgga
acacctggtacagttaagaatttgatgtcatacaagaagctgggtgtaagcggtgtgaag
attcttgttttcgatgaagctgatcacatgctggctgaggatggatttaaagatgattct
ttaaggataaaaaaggagatagagaaatttgacactcactgccaggtgctccagttttct
gctacattcgatgaaacagtcagaaatttcatctcaagggtggtgaaggacaagaatgaa
ctatttgttaagaaagaagagctatccttggcagctgtgaagcagtacaaggtctactgc
cctgatgaactaaccaaaattgatgtgatcaaaaccaagatatttgacctaggggagaac
attggacagcgaatcatttttgtagggtcaaaagctagtgcaagaatgttgcataaacaa
cttcatgaggatggttatgcagttacaaatgttcatggtgccctcactcctgaacataga
gacaagacgattaaagaattcagagagggttacacccaagttcttattgcaactgacatg
cttgctcgaggctttgacagccagcaggttaactgtgttgtcaattatgatcttccaata
aagtatcaagcttggtctaggaagcaagcagctccagagcctgattatgaggtgtacttg
catagatgtggtcgggcagggcgttttggccgcaagggagctgtgtttaacttgctgtgc
catgattctgatcaacaactcatgggaaaaattgagcagcattatagcattcaagtaccg
gaggttaacataagtgaagaagcttttgacgatgctctcaagttagcgggattgaaggaa
tga
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