Rosa chinensis (China rose): 112192112
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Entry
112192112 CDS
T06020
Name
(RefSeq) auxin response factor 18 isoform X1
KO
K14486
auxin response factor
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112192112
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
GIPC1_GH1
Motif
Other DBs
NCBI-GeneID:
112192112
NCBI-ProteinID:
XP_024187446
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Position
3:complement(15483380..15487293)
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AA seq
705 aa
AA seq
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MITFMDSKEKLKEGEKCLDPQLWHACAGGMVQMPSVNAKVFYFPQGHAEHACGPVDFRNC
PRIPPYILCRVSAIKFMADPETDEVYAKIRLVPLSSSEAGYEDNGIGGINGADSQDKPAS
FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGT
PRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGPESSSGWNPAG
GNCAMPYGGFSSYLREDEGKLMRNGNGNGSNSNGSLMGKGKVGPESVLEAATLASNGQPF
EVVYYPRASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVHVSE
PMRWPESPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLTPFSPPRKKMRLPQHP
DFPFEGQLPMPTFSGNHHLLGTSSPFGCLPDKTPAGMQGARHAHYGLSLSDIHLNKLQSG
LFPAGFPPLDHVATPTKFSNNTMIQRPTMSENVSCLLTMAHSPQSSKKPDDVKPPQLMLF
GQTILTEQQISMSSSGDTVSPVLTGNSSSDGSGDKMANHSDNSGSALHQQSVQERSSGEG
FHWYKDTRHEAEPNLETGHCKVFMESEDVGRTLDFSQFKSYDELYTKLADMFGIENSETL
NHVLYRDATGAVKHIGDEPFSCSDFVKTARRLTILMDSGSNNVGM
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgattacgtttatggattcgaaagaaaaattgaaggagggagagaagtgcttggatcct
cagctatggcatgcctgtgctggagggatggttcaaatgccatcggtgaatgccaaggtg
ttttacttccctcagggccacgccgaacacgcttgtggccctgtcgatttcaggaactgc
ccgaggattccgccttacatactctgcagggtctcggccatcaagttcatggctgatcct
gagactgacgaggtttatgccaagattaggctggttcctttgagctccagtgaggctggt
tatgaggataatggaattggggggattaatggggctgattcgcaagataagccggcctca
tttgcaaagacgctgactcagtcggatgctaacaatggtggggggttttctgtgccgaga
tactgtgctgagaccatctttcccagattggactactcggctgatcctcctgtgcagacg
attcttgctaaggatgttcatggcgagacttggaagtttaggcacatatatagggggacg
ccgaggcggcatctattgaccacagggtggagtacttttgtgaaccacaagaagcttgtt
gctggggactcgattgtgtttttgagggcggagaacggtgatctctgtgttggaattcgg
cgagccaagaggggaattgggggtggcccggagtcatcttctgggtggaatccggcgggt
gggaattgtgccatgccatatggagggttctcttcctatttgagggaggatgaggggaaa
ctgatgagaaatggcaatggtaatggctcgaattcgaatggaagtctaatggggaagggc
aaagttggtcctgaatcagttttggaagctgcaacacttgcttcaaatggacaacccttt
gaggttgtttactaccctcgagcaagtactccagagttttgtgtgaaagcgtcgttggtg
aaggcagcactgcagatccgttggtgccccggaatgagatttaagatggcctttgaaacc
gaagattcttccaggataagttggttcatgggaaccatatcctctgttcatgtttctgag
cctatgcgctggcctgaatcaccttggcggcttctccaggttagctgggatgaacctgat
ttgcttcagaatgtcaagcgcgttagcccgtggctggtagaattggtgtcaaacatgccc
gccatccatctgacacccttctcaccaccaaggaagaagatgagactgccacaacacccc
gatttcccatttgagggacaacttccaatgccgacattttccggcaatcaccacctcctt
ggaaccagcagccccttcggttgtctgcccgacaaaactcctgctggcatgcagggagcc
aggcatgctcattacggtctatccttatcagatatccacctcaataaactgcaatcaggt
ctatttccggctggtttcccgccacttgatcatgttgctactcccaccaaattctccaat
aacacaatgattcaaaggcctaccatgagcgagaatgtgtcttgcttgttaactatggca
cattctccacagtcttcaaagaaacccgatgatgtaaagccaccgcagctcatgctcttc
ggtcaaacaatacttactgagcagcaaatctctatgagctcctctggcgatactgtctca
ccagtgcttactggaaatagttcgtcagatggaagtggagataaaatggcaaaccattct
gataattctggatctgcacttcaccaacaaagcgtacaagagcgatcatccggtgaaggt
ttccattggtataaggacactcggcatgaagctgaaccaaatttggaaactggtcactgt
aaagtctttatggaatctgaagatgtaggccgcactcttgacttttcacagttcaagtct
tatgatgaattgtatacgaaactggcagacatgtttggcatagaaaattccgagacactg
aaccatgtgctctatcgagatgctactggcgcagtcaaacacattggagacgaaccattc
agttgcagtgactttgtgaaaacggcaaggagattgacgattctaatggattcaggcagc
aacaatgtaggaatgtaa
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