Rosa chinensis (China rose): 112192184
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Entry
112192184 CDS
T06020
Name
(RefSeq) uncharacterized protein LOC112192184 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112192184
Membrane trafficking [BR:
rcn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112192184
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
112192184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40
Synaptobrevin
WD40_Prp19
WDR55
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
112192184
NCBI-ProteinID:
XP_024187543
LinkDB
All DBs
Position
3:10374870..10383898
Genome browser
AA seq
1120 aa
AA seq
DB search
MFAKRLLQKAVNHHHHSQHSLQQESMTSADLDLRVAAHYGIPSTASILAFDPIQRLLAIG
TLDGRIKVIGGDGIEGLLISQKQLPYKYIEFLHNQGYLVSILNDNNIEVWNLEGRCLVCS
LEWESNITAFSVIHGSNLMYVGDEYALLAVVKYDADEGKLLQLPYHISADSLSEAAEFPF
PTDQPIVGLLPQPGSSGNRVLIAYQNGLLILWDVSEAQIVFIGGGKDLQLKDGVVKPTDE
VNIDSPENTIEHQLGEKEISALCWASSNGSILAVGYVDGDILFWNTSSAASIKGQQALSS
SNNVVKLRLSSSERRLPVIVLQWSTLNKSHNDSDGQLFIYGGDEIGSDEVLTVLTLDWSS
GMGNLRCVGRTDLTLTGSFADMILLPNFATIAGNHRADAFVLTNPGQLHFYDETSLSALI
SQQEKKPSVSALEFPVVIPTTNPTMTAARLIRTATGENSLKSLSELCSVVNLGSLPTSLD
GTKWPLTGGVPSQLSLSKSSGIERVYLAGYSDGSVRIWNATYPLLSFISVLEGEVQDIKV
AGLSSPVSRMDFCSFTLNLAVGSESGLVRIYNLKGHSDGVKFLFVTETKCEVHSLSQGKG
PQCRAVFSLTNSRVQALQFVKHGGKLAVGFDCGYVAMLDTNSLSILFFIKDAYFSSSSVI
SMTWKEITNPQGLLKSSKLSETKSPVHPAEEVMFILTKDANIHLICGNTGNMVIPRPWHL
KKESIAISMYVIDGRISASKVSDANPPEEASKDTSTKNESMAGSSPIPIDSLEVDQDHNT
ENAYSEERLLNSLILLCCVDSVQLYSTKSVIQGNNEPIRKVKHARPCIWTATLKKVEKVW
GLTLLFQTGEIEIRSIPDLELVKESSLMSILRWNCKANMDKTMSSDDAHITLANGYETVF
ISLLAAENDFRIPESLPCLHDAVLAAAADAALSASLNQKKKQSTAPAILGGIVKGLKGGK
MVQSGDSTATPKSRFDHLEGMFCKSQQWDSVPALDHQENLELNIDDIEIDEPLRVTSTST
SHDDDNKRREGDSERDRLFQGGTSDTKPRVRTAEEVKAKYRKAEDASSVASQARNKLMER
GQKLEKLSKRTEDLQNGAEDFASMANELVKTLEARKWWHI
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaagcgactcttacagaaggccgtcaaccaccaccaccattctcagcacagt
ttgcaacaagaaagtatgacgtcagcagacttggacctgcgagttgcagctcactatggt
attccatctacggcgtccattcttgctttcgaccccattcagcggcttctggccatcggg
acattggatgggaggattaaagtaattggtggtgacggtattgaaggacttcttatatcc
caaaaacaattgccttacaaatacatcgagtttctacataaccagggttacttggtcagc
atcttaaatgataataacattgaggtttggaatcttgagggcagatgcctagtttgttct
cttgagtgggaatcaaatataactgctttttctgtaatccatggctcgaacttaatgtat
gtaggcgatgagtatgctctgttggctgtggtgaagtatgatgctgacgagggaaaactt
ttgcagttgccatatcatatatctgcagattcattaagcgaagctgccgagtttccattt
cctaccgaccaaccgatagttggacttcttccccaacctggttcatctggaaatagagta
ctgattgcgtatcaaaatgggttgcttattctttgggatgtgtccgaggctcaaattgtt
tttattggaggtggtaaggatctccaactaaaggatggagttgttaagcctactgatgaa
gtcaatatagattctccagaaaatacaatagaacatcaactgggagagaaagagataagt
gctctttgttgggcatcatccaatgggtccattctggctgtgggatatgtagatggagat
attctgttctggaacacgtcatctgctgcttccattaagggtcagcaagcattgtcatca
tctaataatgttgttaagttacgattatcatcatcagaaagaagacttcctgtcattgtc
ttacagtggtccacattaaataaatcccataatgattctgatggacaactatttatctat
ggtggcgatgaaataggatcagacgaagttctgacggttttgactcttgattggtcttct
gggatggggaatttaagatgtgttggccgtacagaccttacccttactggttcgtttgca
gacatgattttattaccaaattttgcaacaattgcgggtaatcacagagctgatgcattt
gtgttaacaaaccctgggcaattgcacttttatgatgaaaccagtctctcggccctaata
tcccagcaagaaaagaaaccatctgtctctgctttggagtttccagtggtgatacctacc
actaatccgaccatgactgctgccagacttattaggacagctactggggagaactcgtta
aagtctctatcagagttatgctcagttgtgaaccttggctcactaccaacttcattagat
ggaacaaaatggcccttgactgggggtgtgcccagtcaattgtctctttcgaagagtagt
ggtattgagagagtatatctagcaggatattcagatggatctgttcggatctggaatgcc
acctatccgctcttatcttttatctctgttttagaaggcgaggtgcaagatataaaagtg
gctggtttaagttctccggtatcgagaatggatttctgcagcttcactttaaacttggct
gttggcagtgaatctggtttggttcgaatttataacctcaaagggcattcagatggggta
aaattcctctttgtgaccgaaaccaaatgtgaagtccacagtttgtctcaaggaaaagga
cctcaatgcagagctgttttcagtcttactaattcccgagttcaagcacttcagtttgtg
aagcatggaggtaaacttgcagtgggatttgattgcggttatgttgcaatgctggacaca
aattccttatctatattgttcttcataaaagatgcatatttctctagctcctcagtcatt
tcaatgacttggaaagaaattacaaatcctcaaggcctcttgaagagttcaaagctctcg
gaaactaaatcaccagttcaccctgcagaggaagtaatgttcattctaaccaaagatgca
aatatacatttaatttgtggaaacacgggtaatatggtcatccctcggccatggcacttg
aaaaaggagtcgattgcaatttcaatgtatgttatagatggcagaatttcagcctctaaa
gtatctgatgcaaatccgccggaagaggcctcaaaggatacttcaaccaagaatgagtct
atggccggcagttctccaattcctatagattcacttgaggtggaccaggaccataataca
gaaaatgcatactctgaagaaagattgttgaattcactgattttgctttgttgtgtggat
tcagtgcaattgtactccacaaaatctgtaattcagggaaacaatgaacccattcgaaag
gtgaaacatgcaagaccttgcatttggacggcaactttgaaaaaagttgaaaaagtttgg
ggattgactttgctgtttcagactggagagattgaaattagatctattcctgatttagaa
ttggtgaaagaaagctccttaatgtcaattctaaggtggaattgtaaggcaaatatggat
aagacaatgagttccgatgatgcacatatcacactggcaaatgggtatgaaacagtattc
atctctctgttagctgcggaaaatgatttcaggattccagagtctttgccttgtctccat
gatgcagttcttgcagctgctgcagatgctgcattaagtgcctctttaaatcagaagaag
aaacagagtactgcccctgcgatattaggtggtattgtcaaaggcttgaaaggaggaaaa
atggttcagagtggagattctactgcaactcctaaatccaggttcgatcatttagaaggc
atgttttgcaagtcccagcagtgggactcggtcccagctttggatcatcaagaaaatctg
gagcttaatatagatgacattgaaattgatgaacctctacgcgtgacatctacttcaaca
tcccatgatgatgataataaaaggagagaaggggactcagaaagggatagattatttcaa
ggtgggactagtgatacaaagcccagagttaggactgctgaagaagttaaagctaaatat
agaaaagctgaggatgcttcttcggtggcttcccaagcaagaaataagctcatggagagg
gggcaaaaacttgagaaactcagcaagcgcacggaggatctgcagaatggagctgaagat
tttgcatcaatggcgaatgagctagtcaagacattagaagcgcgaaaatggtggcatatt
taa
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