Rosa chinensis (China rose): 112192368
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Entry
112192368 CDS
T06020
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112192368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112192368
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112192368
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
112192368
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Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
CHASE5
Motif
Other DBs
NCBI-GeneID:
112192368
NCBI-ProteinID:
XP_024187823
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Position
3:complement(1079780..1082517)
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AA seq
195 aa
AA seq
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MGNDTELVTPGEKLGRASEFKAGRGAYVSPDNLTVYASLTGLRHIVSPPPDSPDQRPIVE
VTGHKAHGAIPEPGSIVIARVTKVMARMASADIMCLGTKSVRENFTGIIRLQDIRATEID
KVDMHKSFHPGDIVRAIVLSLGDARAYFLSTAKNELGVISAQSAAGVPMVAISWTEMQCP
ITGQIEHRKVAKVGG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgatacagagttggtgaccccaggtgaaaagcttggaagagcctccgaattc
aaagcaggcagaggtgcctacgtgtcacctgataatctcaccgtctacgcttccctcact
ggcctccgccacatcgtatccccgcctcctgactcaccggaccagagacccattgtggaa
gtaactggtcacaaggcccatggtgctattccggagcctggatctattgtcattgctaga
gttaccaaagtgatggccagaatggcttctgctgatatcatgtgtctaggcactaagtct
gtgcgggaaaactttaccggcattattaggcttcaagatattagagcaaccgagattgat
aaagtggatatgcacaagtcttttcaccctggtgacattgtcagagctattgtgctatcc
cttggagacgcaagagcttactttctgtcaactgcaaagaatgagctgggtgttatttct
gctcagagtgcagcaggtgtgccaatggtggcaataagttggacagagatgcaatgcccc
atcacagggcaaattgagcacagaaaggttgctaaggtcggaggataa
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