Rosa chinensis (China rose): 112192449
Help
Entry
112192449 CDS
T06020
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112192449
03041 Spliceosome [BR:
rcn03041
]
112192449
03036 Chromosome and associated proteins [BR:
rcn03036
]
112192449
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112192449
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112192449
mRNA cycle factors
Common to processing body (P body) and stress granule
112192449
Spliceosome [BR:
rcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112192449
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112192449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112192449
NCBI-ProteinID:
XP_024187967
LinkDB
All DBs
Position
3:24461866..24466542
Genome browser
AA seq
654 aa
AA seq
DB search
MRSWADSVGNDGDNADAGSSENNSSSRPSDNNKSSRPSENRSSSRPSDNSSSSRPARSTY
VPPHLRNRPPSADPPAPSQTTLPPANVGYNGPAAGSAWGGGGGFRSDVGRGGYVGGGGGG
GRGGGGWNNRSGGWDRGREREVNPFADDDNTEQPFEQENTGINFDAYEDIPVETSGSDVP
PPVNTFAEIDLGDALNLNIRRCKYVRPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCF
PIISGIMQGQYAQRPRGARTVYPLALILSPTRELSCQIHEEARKFSYQTGVKVVVAYGGA
PINQQLRELERGVDILVATPGRLVDLLERARVSLQMIQYLALDEADRMLDMGFEPQIRKI
VEQMDMPPPGLRQTMLFSATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVHE
SDKRSHLMDLLHAQRENGTHGKQALTLVFVETKKGADALEHWLCINGFPATTIHGDRTQQ
EREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS
GLATAFFNENNLSMAKPLADLMQEANQEVPAWITRYASRASYGGGRNRRSGGGRFGGRDF
RRENSFNRGSDFYGGGNNGGGYGGGGYGGGGGYGGGGGYGGGGYGGGTGPSAWD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcatgggcagattctgtaggtaatgatggagacaatgcagacgccggttcgtct
gaaaataacagctcatctcgtccatctgacaataacaaatcatcgcgtccatctgaaaat
agaagctcatcgcgcccgtctgacaatagcagctcatctcgtcctgcacgatcaacttat
gttccgccacatcttcgtaataggcctccgtctgctgatcctccggctccttcacagact
accctgccaccagccaatgtaggttataatgggcctgcagctgggtctgcctggggcggt
ggtggtggttttaggtctgatgttgggcgtgggggatatgtaggtggtggtggtggcggt
ggtcgaggtggtggtggttggaacaatagaagtggagggtgggaccgtgggagggaacgg
gaggtaaatccctttgctgatgacgataacacagaacagccctttgagcaagaaaacaca
ggcatcaactttgatgcttatgaggatatcccagttgaaactagtggatctgatgtcccg
ccacctgtgaatacttttgcagagatagatctaggggacgcattgaatttaaatattagg
agatgcaagtatgtgaggccaactcctgttcagcgtcatgcaataccgatctctcttgca
ggacgagatttgatggcctgtgctcagacaggttctggcaagacagctgctttctgcttt
ccaattattagtgggatcatgcaggggcagtatgctcagagacctcgtggagcacgtact
gtctatcctcttgctcttattctctcccctactagagaactctcgtgtcagatacatgaa
gaagctagaaagttttcttatcaaactggtgtcaaggtggtagttgcttacggaggagcg
ccaataaaccaacagttgagagagcttgaaagaggagtagatattcttgtggcaactccg
ggtcgattggtagatctgcttgagagagctagagtatcattgcagatgatacaatatttg
gctcttgatgaggcagatcggatgctggacatgggttttgagcctcaaattaggaagata
gtggaacagatggacatgcctccaccaggtttgagacagaccatgctgttcagtgcaacc
tttccgaaggagatacagagactggcgtcggattttctggcaaactatatatttttggct
gttggaagggttggctcaagtactgatttaattgttcaaagagttgaatttgttcatgaa
tctgataagagaagtcatctcatggacctccttcacgcacaaagggaaaatggaactcat
ggcaagcaagctttgacattagtttttgtggagacaaagaagggagcagatgcgctggaa
cactggttgtgtattaatgggtttccggcaactactattcatggtgacagaacacaacag
gaaagagaacaggcactgagatcattcaagagtggacatacaccaattttagtggcaaca
gatgtggctgcacgtggtctggacattccccatgtagctcacgtggtaaattttgatctt
ccaaatgacattgatgattatgttcaccggataggtcggacagggcgagctggaaaatca
ggacttgcaacagcattctttaatgagaacaacctttcgatggcaaaaccactagctgat
ctaatgcaagaagcaaatcaggaagtgcctgcttggattactcgatacgcatcgagggct
tcttatggtggtggtagaaaccggcgatctgggggaggccgttttggaggccgtgacttc
agaagggagaattctttcaacaggggttcagatttctatggagggggaaataatggcggc
ggatatggtggcggcggctatggtggtggcggcggctatggtggtggcggcggctatggt
ggtgggggttatggcggtggtactggtcctagtgcttgggactag
DBGET
integrated database retrieval system
