Rosa chinensis (China rose): 112192524
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Entry
112192524 CDS
T06020
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 4
KO
K10523
speckle-type POZ protein
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112192524
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112192524
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
BACK
TRAF-mep_MATH
MgtE_N
SAM_5
BTB_2
Motif
Other DBs
NCBI-GeneID:
112192524
NCBI-ProteinID:
XP_024188056
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Position
3:46807463..46813240
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AA seq
438 aa
AA seq
DB search
MSSGSSRSRGGGGEKSGVGVVVPSSSRFVTQTVNGSHQFLIKGYSLAKGIGVGKHIASEN
FTIGGYQWAIYFYPDGKNPEDNSAYVSVFIALASEGTDVRALFELTLLDQGPDAKHKVHS
HFDRSLESGPYTLKYRGSMWGYKRFYRRTMLESSTFLKDDCLKINCTVGVVVSAIDSSRL
HSIDVPDSDIGAHFGMFLENGEGSDVTFNVSGVKFPAHKLVLAARSPEFENEFFNGLEED
NQEILVDDMEPKVFKALLHFLYTDNLIEDEELSESSSSCMHSLSDILAAKLLAAADKYGL
TRLRLMCESVLCKDISVNSVANILALADRYSAVELKSVCLKFAAENLVAVMETDGFELLK
ENCPLLQSELLKTVAGSEEELSGGGKSQSVWAQFSDGGNSNDRRARQQTLQNGERGQRIW
VQSLDGSDARGMSPGQEG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagggagcagcaggagtagaggaggaggaggagagaagagcggcgtcggtgtg
gtggtgccgtcgagctcacggttcgtgactcagacggtgaacggctcccaccagttcctc
atcaaaggctactctctcgccaaaggcatcggcgtcggaaaacacattgccagcgagaat
ttcaccatcggcggttaccagtgggccatctacttctaccccgacggcaaaaaccccgag
gacaactccgcctacgtttccgtcttcattgccctcgccagcgaaggcaccgatgtccga
gccctcttcgagttgaccctcctcgatcagggccccgacgccaagcacaaggtccattcc
catttcgatcgatccctcgagagcgggccctacactctcaagtacagaggcagcatgtgg
ggctacaaacgcttttaccgacgcaccatgcttgaatcctccaccttcctcaaggacgat
tgcctcaaaattaactgcaccgtcggcgttgtggtttccgccattgatagctccagactg
cactccattgatgtccctgactctgacatcggagcacatttcggtatgtttttggagaat
ggggaaggctccgatgttactttcaatgtctccggggttaagtttcctgctcacaagctc
gtattggctgctcgttcccccgaattcgagaatgagttctttaatggactcgaagaggac
aatcaggagatactggtcgacgatatggagcccaaagtctttaaggctttgcttcacttc
ttatatacagataatcttattgaggatgaggagttgtcagagtcaagttcttcttgcatg
cattctttatccgacatattagctgcaaagttgctagctgcagcagacaaatatggctta
acaaggcttcgactcatgtgtgaatctgttctctgcaaggatatatctgttaattctgtt
gcgaatatccttgccttagccgatcgctattctgctgtcgaactaaaatctgtttgcctc
aagtttgctgctgaaaatcttgtcgctgtcatggaaacggatggttttgagttgctcaag
gaaaactgtccactgctgcagtcagagcttctgaagacagttgcaggaagtgaggaggaa
ctaagtggagggggaaagagtcaaagcgtatgggcgcagttttcagatggtgggaattca
aatgatagacgtgcaagacaacagaccctgcaaaatggagagagaggtcagagaatttgg
gtccagtctttggatggcagtgatgctagaggaatgagtcctgggcaagaaggttga
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