Rosa chinensis (China rose): 112192546
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Entry
112192546 CDS
T06020
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112192546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112192546
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
112192546
U7-dependent histone pre-mRNA processing factors
112192546
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
RRM_10
UBM
TMEM65
RRM_occluded
FAM70
partial_CstF
Spo7_2_N
Motif
Other DBs
NCBI-GeneID:
112192546
NCBI-ProteinID:
XP_024188100
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Position
3:complement(27485809..27490731)
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AA seq
302 aa
AA seq
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MASSRRIFVGNIPYDATEQQVKALCEEVGPVVTFRMVTDKDTGKPKGFGFCEYRDEATAF
SALRNLQDCELNGRRLKVNFAANDKANHQPIGLQAAVDAAAAMAGALGGSQQQALANDPL
TVHLSKMSRNQLAQMVSEMKGIAVENQEMAQELLLAKPQLNRALLQAQMMLGMVTPQMLG
QVNMRPMLPFNNGQPQQQQLVPKSEPVQISEPQTLVTPQMMQKRSMPPLNMGQQQQQQVP
KSEPVQISEPQILPTGVDPALLQQVLSLPPETVASLAPELRQQVIQLQQMYRQDQRIPCS
SG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcgccgcattttcgttgggaacatcccttatgatgccaccgagcaacag
gtcaaggctctctgcgaggaggttggccctgttgtgactttcagaatggttacagataaa
gacaccgggaagccaaagggttttgggttctgtgagtacagggatgaagcgacggcgttt
agtgcgctgcgaaatcttcaggattgtgagctcaatggccggcgtttgaaggttaatttt
gctgctaatgataaggccaatcatcagccgattggtctccaagcagctgttgatgcagcc
gccgcaatggcgggagctctaggcggttctcagcagcaggcattggctaatgatcctttg
acagtccatctgtccaaaatgtcgaggaatcagttggcgcaaatggtctcggagatgaag
ggaattgctgtggaaaatcaggagatggctcaggagctgttgcttgcaaagccgcagtta
aacagggctctgcttcaggcacaaatgatgctaggaatggtcacaccacaaatgttggga
caggttaatatgaggccaatgcttcccttcaataatggccagccgcagcagcagcagctc
gttcccaaatcggaaccagtacagatctcggagcctcagactctggtcaccccacaaatg
atgcaaaagaggtcaatgcctccattgaatatgggccagcagcagcagcagcaagttcca
aaatcagaaccagtgcaaatctctgagcctcagattcttccaacgggggtggaccctgct
ttgttgcaacaagttttgagcctacctcccgaaacggtggcttcattggcacccgaactg
cgacaacaggtcattcaactccaacagatgtataggcaagatcagaggatcccttgcagc
agtggatga
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integrated database retrieval system