Rosa chinensis (China rose): 112192662
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Entry
112192662 CDS
T06020
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112192662
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112192662
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112192662
Protein phosphatases and associated proteins [BR:
rcn01009
]
HAD phosphatases
Fcp/Scp phosphatases
112192662
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112192662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
112192662
NCBI-ProteinID:
XP_024188263
LinkDB
All DBs
Position
3:complement(6899442..6903767)
Genome browser
AA seq
702 aa
AA seq
DB search
MEKHEHQNPSKSVNDAVYKLQLALLDGVKTLDHLYLAGSIISRSDYNDVVTERSIADLCG
YPLCSNALPSEASRSRKGHYRISLKEHKVYDLRETKLYCSSKCVIDSKAFALSLSEERCD
ILDFGKVERVLGQFGEKDEQGKKEIGDLGISKLKIEEKSETYSGKLEDWVGPSNAIEGYV
PKKDRASKPLGSKKIKQGSKGKDTKPSGGGKQLILNDMDFMSTLLACDEYSVSKMPPTVA
GNSVDTTLKEPKGKVGGKDSESGFSLLETSAAPNKSEVGVMDVGDLGMSRLKIEEKVESF
VGKAEKSSEARLRSSLKHSGTKKLSRSVTWADEKIDSTGRRNLCEVRDMEDGIENPGAFG
SLHKPSTSNEAGSSFNWVDKTIDSTKSENICEVREMQDAKDVPEVLGSSVLQDNEWFESA
EACASALSQAASAVATGESDTNDAVSKAGIIILPHSDGVDEEESIVDDVYEEDSIEDSVD
EEESTEDVDMLEPEHAVSKWPGKPESSQFDLFNPEDSWFDAPPDGFNLTLSPFATMWNAL
FTWITSSTLAYIYGKDDSSHEEFLYVNGRSYPHKIVLADGRSSEIKLTVGESLSRALPEV
VAELGLPVSSLEKGMGFMLNTMSFIEALPAFRMKQWQVIALLFIEGLSVCRIPALTSRMT
NRRVLIQKVLDGARISVEEYEIMKDFLIPLGRAPQFSSQSGA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcacgagcatcagaatccatcgaagtcagtgaacgacgcagtgtacaagctc
cagctggcactcctcgacggcgtcaaaaccctagaccacctctacttagccggctccata
atctcccgctccgactacaacgacgtcgttacggagcgatccatcgccgacctatgcggc
taccctctctgctccaacgccctaccttccgaagcttcccgttcccgcaagggtcactat
cgcatttcgctcaaggagcacaaggtgtacgatctccgagagacgaagctctactgctcc
tccaagtgcgtgatcgatagcaaggcgtttgctctgagcttgagcgaggagaggtgtgat
atcttggatttcggaaaggtcgagagggttttggggcaatttggggaaaaagatgaacaa
ggcaagaaggagattggggatttggggatttctaagttgaagattgaagaaaagagtgag
acttatagtgggaaattggaggactgggttggcccttccaatgccattgaaggatatgtt
cccaaaaaagatagggcttccaagccgttgggttcgaagaagatcaaacaagggtccaaa
gggaaagatacgaagccgagtggtggtgggaaacaattaattttgaatgatatggacttc
atgagtacactattagcttgtgatgaatatagtgtgtccaaaatgccaccaactgtagcg
gggaatagtgttgatactacgttaaaggaaccaaaaggaaaagttggcggcaaagattca
gagagcggatttagtttgttggaaacctcggctgctcctaataagagtgaagtgggtgtg
atggatgttggggatttaggtatgtctaggttgaagattgaagagaaagtggaatccttt
gttggtaaggcagagaaatcgagtgaggctagactgaggtcttctctcaaacattcaggg
acaaagaaacttagtcgctctgttacttgggctgacgaaaagattgatagtaccgggagg
agaaatctttgtgaggtgagagacatggaagatggaattgaaaatcctggtgcatttggc
agcttgcacaaaccttctacatcaaatgaagctggttcctcttttaattgggttgataag
acgattgatagtactaagagtgaaaatatttgtgaggttagagaaatgcaagatgcaaaa
gatgttcctgaggtattaggcagttcagtcctgcaagacaatgaatggtttgagtcagca
gaagcctgtgcatcagcattgagtcaggcagccagcgctgttgcaactggagaatctgat
actaatgatgctgtgtcaaaagccgggattattatattgccacattcagatggtgtggat
gaagaagagtccatagtggatgatgtgtatgaagaagattccatagaggatagtgtggat
gaagaagagtctacagaggatgttgacatgcttgaaccagagcatgctgtttcaaagtgg
ccaggaaagcccgaaagttcacagtttgatttatttaaccctgaggattcttggtttgat
gctccaccagatggtttcaatttaactttatctccttttgcaacaatgtggaatgcactc
tttacatggataacatcatctacattggcttatatatatggaaaggatgacagttcccat
gaagagtttctctatgtcaatgggagaagttatccccataagattgtgttggcagatggt
cggtcttcagaaatcaagctaactgtgggtgaatctctctctcgggctctaccagaagtt
gttgctgaactagggctaccagtatccagtttagagaaaggaatgggcttcatgttgaat
acaatgtcctttattgaggcgctaccggcattcagaatgaaacagtggcaagtgattgct
cttcttttcattgagggcctctctgtttgtaggatcccggcacttacttctcgcatgaca
aatagaagggtactgattcagaaggtgctggatggtgcccgtataagtgtagaagagtac
gagattatgaaggatttcctaataccgcttggccgagcgcctcaattctcatcccagagt
ggtgcttaa
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