Rosa chinensis (China rose): 112192687
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Entry
112192687 CDS
T06020
Name
(RefSeq) rRNA biogenesis protein RRP5 isoform X2
KO
K14792
rRNA biogenesis protein RRP5
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112192687
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
90S particles
Other 90S particles
112192687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
UTP6_C
COG4_N
Motif
Other DBs
NCBI-GeneID:
112192687
NCBI-ProteinID:
XP_024188307
LinkDB
All DBs
Position
3:complement(24367835..24385467)
Genome browser
AA seq
1929 aa
AA seq
DB search
MAPSSKKPQGGNNKNPRDATKFNKSSKKPFKPNKDHNNAARSEAMALQLEDDVPDFPRGG
GSSLNRKERDEIRAEVDAEFEAEEREMKKKGKKKRVPKDSLVNEDEMGSLFGDGITGKLP
RYANKITLKNISPGMRVWGVVAEVNEKDLVISLPGGLRGLVRASDAFDPILDDETEALAD
SVLPSIFRIGQLVSCIVLQLDEDKKEKGKRKIWLSLRLSLLHKGFTLDSVQEGMVLTAYI
KSIEDHGYILHFGLSSFTGFLPKNSQADSKVQVSSGQLLQAAVRRVDKTRKVVHMSSDPE
MVSKCVTKDLKGISIDLLVPGMMVNARVLSTLENGVMLSFLTYFTGTVDIFHLQNIYPTT
NWKEDYNQNKKLNARVLFVDPSTRAVGLTLNPHLVRNKAPPSHVKIGDICDDAKVVRVDR
GLGLLLEIPSTQVSTPAYVSISDVAEEVRKLEKKFKEGTRVRVRILGFRHLEGLATGILK
ASAFEGSVFTHSDVKPGMVVRGKIIAVDSFGAIVQFPGGVKALCPLTHMSEFEIAKPRKK
FKVGAELVFRVLGCKSKRITVTHKKTLVKSKLGILSSYADAADGLITHGWIRKIEERGCF
VHFYNGVQGFAPRSELGLEPGSDPSSMYHVGQVIKCRVIGSNATSRRIKLSLIIQPPRVS
EDDMAKLGSLVSGVVDRVTPNAVMVYVNAKGYSMGTIFTDHLADHHGLAALMKSVLKPGY
EFDQLLVLDTEGNNLILSAKHSLINSAPMLPSEVSQVHPNTVVHGYICNLIDTGCFVRFL
GRVTGFSPRHKAMDDHKGDLSEAYYIGQSVRSTILDVNSETGRITLSLKQSSCSSTDASF
IREYFISEEKIAKLQVLDSKESKSDWSEGFSIGSVVEGKVQEAKDIGVVVSFEKYNDVFG
FITQYQLAGTTVETGSIVRAVVLDVAKAEHLVDLSLKPEFITNLKQESSKSQTHMKKRRR
EVSDDPEMHETVNAVVEIVKENYLVLSIPKYNYAVGYASISDYNTQKFPQKQFLNGQSVN
ATVMALPSPTTAGRLLLLLNSLSESADTSSSKRAKKKSSYKVGSVVQAEITEIKALELRL
KFGIGFHGRVRITEVNDDLLEDPFNNFRIGQTVTARIVAKTNYSDNNKKGFQWDLSLKPS
LLTGSCEIEENILKGDLDFSVGKHVTGYVYKVDAEWVWLTISRNVRAQLFILDSACEPSE
LQEFQKRFHVGNAVSGHVLSVSKEKKLLRLVSYPFTPIADKAVDNEVSKTDANVSMLNAT
AHIHEGCVVGGRIIKKLPGVGGLTVQIGPHMYGRVHYSELSDSWVSNPLSGYEEGQFVKC
KVVECSRSGQGTFHIDLSLRSSLVGTLCQDSNEPDNDKHTHTERPEKIDDLKPNMVIQGY
VKNVSSKGCFILLSRKLDAKILVSNLSDGYVDDPEKEFPVGKLVTGRVSSVEPLSKRVEV
TLKSLSASSLPQSARNNLDSLHVGDIISGRVKRVESYGLFITIDNTNVVGLCHVSELAED
KKDNFETKYKTGERVSAKVLKVDKERHRVSLGMKDLYIMDSDHTPPKQDLDEPIRQTDLV
DDSKSVMCPVGSFLGDQNMDIEHENAEFQFLAQAESRALVPPLEVTLDDVDQGDDIVSQD
QELPDAEDAVDDKKKKLTKKKARDEREREIRAAEERLLEKDIPRTDEEFEKLVRSSPNNS
YVWIKYMEFVLSMADVEKARSIAKRALETINFREENEKLNVWVAYFNLESKYGSPPEEAV
MKVFQKALQYNDPKKVHLALLGVFERSEQHKLADELADSMIKRFKKSCKVWLRRVQRLLV
QQQDGVQDFVSRAEKILPKHKHIKFLSQTAILEFKCGNPERGRSMFENILRQNPKRTDLW
SVYLDQEIRLGETDLIRALFERATSLSLPAKKMKFLFKKYLEYEERHGNEGRANYVKQKA
MSYVENTVA
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcgtccaaaaaacctcagggagggaataacaagaatcccagagacgccaca
aagttcaacaaatcctccaaaaaacctttcaaaccaaacaaggatcacaacaacgccgcc
aggtccgaagccatggctttgcagctcgaggacgacgtccccgacttccccagaggtgga
gggagctctttgaatcgaaaagaacgcgacgaaattcgggcggaagttgatgccgaattc
gaggcagaggagagggagatgaagaagaaagggaagaagaaaagggtgccgaaggacagc
cttgtaaacgaggacgaaatgggctcgcttttcggcgatggcatcactggaaaactacct
agatatgcaaacaagatcactttgaagaatatatctcctgggatgagggtttggggagtt
gttgccgaagtgaatgaaaaggaccttgtaatcagtcttccagggggcttgcgtggacta
gttcgagcgtctgatgcttttgatcctattctggatgatgaaactgaggccttagcagat
agtgtcctccctagcatattccggatagggcagctggtatcttgcattgtgttgcaattg
gatgaggataagaaagagaaagggaaacggaagatctggctttctttgcgcctctctttg
ttgcataaaggcttcactttggattctgttcaagaaggcatggtccttacagcctatatt
aaaagcatcgaagaccatggttacattcttcattttggtttatcttcattcacggggttt
ttgccaaaaaatagccaagctgacagcaaggttcaagtgagcagtggtcaactgcttcaa
gctgctgttagaagagttgataaaacccgcaaggtagttcatatgagttctgacccagag
atggtgtcaaagtgtgtgaccaaagatctcaagggaatttcaattgatctacttgttccg
gggatgatggtcaatgctcgtgtgttatccacccttgaaaatggggttatgttatcattt
cttacttattttactggaactgttgatatatttcatctgcaaaatatttaccctactaca
aactggaaggaagattacaatcaaaacaagaagctcaatgctcgagtattatttgtcgat
ccttcaactagagctgttggtttgacactaaatccacatcttgttcgcaacaaggctcct
ccttcacatgtcaaaattggagatatatgtgacgatgcaaaggtagtgagggttgataga
ggattgggccttctgcttgaaataccatctactcaagtttcaactccggcatacgttagt
atatctgatgtggctgaagaagttcggaagcttgaaaagaagttcaaggaaggtactcgt
gttcgtgtcagaattcttgggtttaggcacttggaagggcttgccacagggattttgaag
gcaagtgcatttgaagggtcagttttcactcactctgatgtcaaacctgggatggttgtg
agaggtaaaataatagctgttgacagctttggggctatcgtgcaattccctggtggtgtg
aaggctctttgtcctcttactcatatgtctgaatttgaaattgcaaagcccagaaaaaaa
tttaaggttggggctgaacttgtgttccgtgtgcttggttgcaagtccaagagaataact
gttacacacaagaaaacacttgtaaagtcaaaactagggattctcagttcatatgctgat
gctgctgatggattaataacacatgggtggataagaaagattgaagaacgtggctgcttt
gtccatttttacaatggagtccaaggatttgccccaagatctgaactcggactggagcca
ggatctgacccaagttcaatgtatcatgttggacaagttatcaaatgtagagttatcggc
tctaatgctacatcgagacgaatcaaacttagcttgataatacagcctccaagggtttct
gaggatgatatggcgaagttgggcagcctggtttcaggagttgttgaccgggtaaccccc
aatgctgtcatggtttatgttaatgcaaaaggttactcaatgggcacaatttttacagac
cacttggcagatcaccatgggctggctgctttgatgaagtcagtattgaagcctggttat
gaatttgatcaattattggttttagacactgaaggcaacaatttgatcctatctgcaaaa
cattctctgattaattcagctcccatgcttccttcagaagtcagtcaagttcatcctaat
acggtagtacatggctacatttgtaacttaattgacactgggtgctttgttcgctttctt
gggcgtgtgactggtttctccccaaggcacaaggcaatggatgaccataaaggagatctt
tcagaagcctattacattggacagtctgttcggagtactatactcgatgtcaatagtgaa
acaggtaggataacactatcattgaagcagtcatcttgctcttcaacagatgcctccttt
atccgggaatactttatttcagaggagaagattgcaaagctgcaagtgttggattcaaaa
gaatccaaatcagattggtcagaaggattttccattggcagtgttgttgaagggaaggtc
caggaggcaaaggacattggagttgttgtcagctttgagaaatataatgatgttttcggt
ttcatcacgcagtatcaattagctggtactactgtagaaacaggctccattgttcgagca
gttgtacttgatgttgccaaggcagagcaccttgttgacttatcgctcaaaccagaattc
attactaacttaaaacaagaaagctctaagagccaaactcatatgaagaaacgaagaaga
gaagtctcggatgatccggagatgcatgagaccgtaaatgctgtggttgagattgtgaag
gagaattacctggttctttctatcccaaagtataactatgctgtaggatatgcatcaatt
tctgactacaacactcaaaagtttcctcagaaacagtttctcaatggacaaagtgtcaat
gctactgtcatggcccttccaagccctacaaccgctgggagattgcttttgctacttaat
tctttgagtgagtccgctgatacttccagttcaaagcgggcaaagaagaaatccagttac
aaagtgggatctgtggtccaggcagagataactgaaataaaggctcttgaactaagattg
aagtttggaatcggctttcatgggcgggtccgtataacagaggtaaatgatgatcttttg
gaagatccatttaataacttcagaattgggcaaacagttactgcaaggattgttgccaag
actaattattcagataacaacaaaaagggtttccagtgggatctgtcattgaaacctagt
ttgttaacaggttcctgtgaaatagaggaaaatattttgaaaggagatctcgatttctca
gttggaaaacatgtcactggctatgtgtacaaggtggatgctgaatgggtctggttaaca
atatctcgaaatgttagggctcagcttttcattcttgacagcgcttgtgagcctagtgaa
cttcaagagtttcagaaacgctttcatgtgggaaatgctgtatctggtcatgttttaagt
gttagcaaggagaaaaagctattacggctggtttcatatccttttactcccatcgctgat
aaagctgttgataatgaggtgtcaaagacggatgcaaatgttagcatgttgaatgcgact
gctcatattcacgagggatgtgttgtaggtgggagaattattaaaaaacttccaggtgtt
ggtggattgactgtgcaaattggtccccacatgtatggcagggttcattatagtgagctt
tctgactcatgggtgtccaacccattgtctggatatgaggaaggtcaatttgtcaaatgc
aaggtcgttgaatgtagtcgctctggacagggaacttttcacattgacttgtcattacgt
tcttctttagttggcacactttgtcaagattccaatgaacctgacaatgacaagcatact
cataccgaaaggccagaaaagattgatgatctgaaacctaatatggtcatacagggttat
gtgaaaaatgtttcatcaaaaggatgttttattttactttcgcggaagcttgatgccaaa
attcttgtctccaatttatccgatggatatgttgatgatcctgaaaaggaattcccagtt
ggaaaacttgttaccggcagggtgtcatctgtggagcctttatcaaagagagttgaagtt
accttgaagtcactgagtgcaagcagtttgccacaatctgcaaggaataatttggatagc
ttgcatgtcggagatattatctctggcagggtaaaacgagttgagtcatatggattattc
atcacaattgacaatacaaatgtggttggattatgccatgtgtcagagcttgcagaagat
aagaaggacaattttgaaactaaatacaaaacaggagagagggtgtcagcaaaagtattg
aaggtggacaaggagaggcaccgagtttctctgggaatgaaggatttgtatattatggat
agcgaccacacacctccaaaacaagatcttgatgaacctatcagacagactgatttggtg
gatgattctaagtcagttatgtgtcctgttggcagtttccttggggaccagaacatggat
attgaacatgaaaatgcagagttccagtttcttgcacaagcagaatcaagagctttagtt
cctccacttgaagtcactcttgatgatgtagaccaaggcgatgatattgttagccaggat
caagagcttcctgatgcggaggacgctgtagatgacaagaaaaagaagctcacgaagaaa
aaagccagggatgagagggagcgtgagataagggctgctgaggaaagattattggagaaa
gatatacctaggactgatgaggaatttgagaaactagttagaagttctccaaataacagt
tatgtttggataaaatatatggaatttgtgctctctatggctgatgttgagaaggcacgc
tctattgctaaaagggctttggagacgataaactttcgagaagagaacgagaagctcaat
gtttgggtggcttattttaatttggaaagcaaatatggaagtcctccagaggaggctgta
atgaaagtcttccaaaaagcgttgcagtataatgatcccaaaaaggttcatctagcactc
ttgggagtctttgagaggtctgagcaacacaagttggctgatgaacttgctgatagcatg
attaagaggtttaagaagtcttgcaaggtttggctaaggcgggtacagaggctcttggtg
caacagcaggatggggttcaggattttgtctctcgtgctgaaaagatccttcctaagcat
aagcatatcaaattcttgtcacagacagccatcctggagttcaaatgtgggaatccagag
agagggcgctccatgtttgaaaatattttgaggcaaaacccgaagagaacagacttgtgg
agtgtttatcttgatcaagaaattcgacttggagagactgatctgattcgtgcattgttt
gagagggcaactagtttgagcctaccagctaaaaagatgaaattcttgttcaaaaaatat
ctggaatatgaggagcgtcacggtaacgaagggagggccaattacgtgaaacagaaggca
atgagttatgttgagaatacagtagcttga
DBGET
integrated database retrieval system
