Rosa chinensis (China rose): 112192847
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Entry
112192847 CDS
T06020
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112192847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112192847
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112192847
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112192847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Nop14
Pox_Ag35
RNA_pol_3_Rpc31
DUF7327
Sporozoite_P67
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
112192847
NCBI-ProteinID:
XP_024188512
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All DBs
Position
3:complement(40843909..40847580)
Genome browser
AA seq
365 aa
AA seq
DB search
MTRFSLGGDEDGEGPSSPRQKRRRLVLRTAATVAIGERGGGGGLQAVQDESSSETEEEEE
EEEEEEEESDSEEEETEGDEFVTLESPRTSIELGSASAAQETALASTTDRSISITLTDPD
VLDCPICCESLTVPVFQCENGHIACSSCSTKIKNKCPSCSWPIGYNRCRAIEKVLESIRM
SCQNIKYGCKERMTCNNKNEHEKACMHSPCSCPHSGCNFVSSTKKLYQHFSSNHLNSATR
FLYNSSFSITINFNDKFLVLQEQNDGILFILDNTTEILGNMVRLSCIQPRFMGGFFYDLT
AKTKGCLLKLQSFTNSTPSHCHSPTSSRSLIIPGDFFSSCGQLKMDICIWRNGQYPPSFQ
SINAT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgacgagattctcgttaggcggagatgaagatggagaaggaccaagcagccccaggcag
aagagacgccgtcttgttcttcggacagctgctactgtcgccataggggaacgaggagga
ggaggagggctacaggctgttcaggacgaatcatcatcggaaacagaagaagaagaagag
gaagaagaagaagaagaagaagaaagtgattcagaagaagaagaaactgaaggtgatgaa
ttcgtaacacttgagtcgccgaggaccagcatcgaattgggttctgcctcggcagctcaa
gagacggctcttgcttccaccacggataggtctatttccatcaccttgaccgaccccgat
gtgcttgattgtcccatttgctgtgaatccttgaccgtccccgtcttccagtgtgaaaat
ggtcatatagcttgctcctcctgcagcacgaagattaaaaataaatgtccttcatgttcc
tggcccattggttataatcgttgtcgtgccattgagaaagttctagaatcaattagaatg
tcatgccaaaacatcaagtatggttgcaaagaacgcatgacgtgcaataataaaaatgaa
catgaaaaggcatgtatgcattcaccttgttcatgccctcattcaggctgcaactttgtc
tcttcaacgaagaagttataccaacatttcagcagtaatcatttgaactctgcaacacgt
ttcctgtacaacagcagcttttcaattacaataaactttaatgacaaatttcttgttctt
caagaacagaatgatggcatattatttatccttgacaacacaactgaaattctaggaaat
atggtgaggcttagttgtattcaacctagatttatgggaggctttttctatgatcttact
gctaaaaccaagggatgtttactcaaattacagtccttcacaaacagtactccaagccat
tgtcatagccctacttcatctcgctcccttataatcccaggtgattttttcagttcttgt
ggccagctcaagatggatatctgcatatggcggaatggtcagtaccctccgtccttccaa
tctatcaatgctacttaa
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