Rosa chinensis (China rose): 112192956
Help
Entry
112192956 CDS
T06020
Name
(RefSeq) pleiotropic drug resistance protein 3
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112192956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112192956
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
112192956
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
RsgA_GTPase
AAA
AAA_16
Rad17
AAA_29
AAA_18
AAA_22
AAA_25
AAA_30
ABC2_membrane_3
RNA_helicase
AAA_15
AAA_23
RuvB_N
AAA_5
AAA_11
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
112192956
NCBI-ProteinID:
XP_024188672
LinkDB
All DBs
Position
3:complement(7026218..7033494)
Genome browser
AA seq
1443 aa
AA seq
DB search
MAQMVGRDDIESLRIELEEIGRSFRSSIQSRNSSFRANSALSSAKDDTDAQYAVQWAAIE
RLPTFERLKSSLFDKGDDGNELDGEGKQVVDVTKLGAMEKHVFIDKLIKHIENDNLRLLR
KIRKRIDKVGVKLPTVEVRYKNLSVEAVCEVVHGKPLPTLWNSVRSTLSLFAKFLGSKTQ
EAKISIIKDFCGSIKPGRLTLLLGPPGCGKTSFLKALSGNLEKSLKFSGEVTYNGQKLAE
FIPQKTSAYISQFDLHIPQMTVREILDFSARCQGIGSRADIMLEVSKREKEAGIIPHPDI
DTYMKAISLEGLKRTLQTDYILKILGLDICADTLVGDAMLRGISGGQKKRLTTAEMIIGP
TKALFMDEITNGLDSSTAFQIVACLQQLVHITDSTLLVSLLQPAPETFELFDDLILMSEG
KIVYHGPRDHVLEFFEDCGFKCPERKGVADFIQEVISKKDQAHYWYRMEPHNYVSVDMLS
KKLKASSFGKKLDEDLLEPFDKLKDNNNALSFSVYSLSKWELFRACSSRELLLMKRNSFI
YVFKTVQIIIIAFITMTVFLRTRMDIDVLHANYYMGSLFFALTILLVDGIPELSMTLQRL
EVFYKQRDLCFYPAWAYAIPATLLKVPVSFVEALVWTSLTYYVIGYSPEFQKFILQFFLL
FAVHLTSISMFRFLASFFQTMVAAMTAGSFAILFLLLFSGFIIKKPSMPGWLGWGFWVSP
LTYGEIGLSVNEFLSPRWQTMPSTNITIGHETLESRGLNFDGYFYWISLGALFGFTMIFN
IGYILSLSFLKSPGSSHGIISHEKLAQIHRTDDSLDDAQVKEKSRIHPSKTTGKMVLPFT
PLTLVFQDVQYYVIPMETREPGFNQKKLQLLSDITGAFRPGVLTALMGVSGAGKTTLLDV
LAGRKTTGCIEGDIKIGGYPKVQETFARVLGYCEQTDVHSPQITVEESLMFSAWLRLASQ
IDSKTKTEFVNEVLETIELDGIKDALVGIPGVSGLSNEQRKRLTIAVELVSNPSIIFMDE
PTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQPNIDIFEAFDELILLKTGGRMIYSGQV
GQHSSRVIEYFQSIPGVQKIKSNYNPATWMLDITSTSAEAEHGIDFAQIYRESSLYGNNI
ELARQLSTPPPGSRDLHFATRFSQNGWMQFKSCLWKQHLSYWRSPSYNLMRIMHTVVSSL
IFGTLYWNQGRKITDQQNLFNILGSMYAGVIFLGINNCATVLQYVATERTVMYREKFVGM
YSPLAFSVAQVVVELPYIFIQAVLFMIITYPMIGYYASAYKVFWYFYALFCSLLYYNYMG
MMLVSLTPNFMVAAILSSVFYTVYNLFAGFLIPKPQIPKWWIWLYYLTPSSWSLNGLLTS
QYGDINKEIIIFGEPKTVSAFLKDYFGFHHDQLALVALVLIAFPIAFASIFAYCIGRLNF
QRR
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatggttggcagagatgacatagagtcacttagaattgagttggaagagata
ggaagaagctttaggtcatcaattcagagtcgtaactccagtttccgagccaattcagca
ttgagttctgccaaagatgacactgatgctcaatatgctgtgcagtgggcagccattgag
agactgccaacgtttgaacggctcaaatcatctttgtttgacaagggtgatgatggaaat
gaacttgatggtgaaggaaagcaggtggttgatgttaccaagcttggagctatggaaaag
catgtcttcatagataagctcatcaagcacattgagaatgacaaccttcgtctcttacgt
aaaatcagaaaaaggatagacaaggttggagtaaagttgcccactgtggaggtgaggtat
aagaatctcagtgtcgaagcagtgtgtgaggtagttcatggaaagcccctcccaactctt
tggaactctgtcagaagcacgctttctctctttgccaagtttctaggttccaagacacaa
gaggccaagataagcattatcaaagacttttgtggttcaataaagcctggaaggttaact
ttactgcttggccccccaggatgtgggaagacctcctttttaaaggctctatcaggaaat
ctggaaaaatcgctcaagttctctggtgaagttacttacaatggacagaagctagcagag
ttcatcccccagaaaacatcagcttatataagccaattcgacctgcatattcctcagatg
actgtcagggaaatacttgatttttcagctcgctgtcagggtattggaagccgagccgat
attatgctggaagtcagtaaaagggagaaggaggcagggattattccacatccagatata
gatacttacatgaaggcaatttctctcgaaggactgaaaagaaccctccagacggactac
attttgaagatccttggacttgatatatgtgctgacactctagttggagatgccatgcta
agaggtatatctggtggtcaaaagaagaggttgacaacagcggagatgatcattggtccc
acaaaagctttgttcatggatgagataacaaatggtctagacagttccactgcatttcaa
attgttgcttgtcttcagcagctggtgcatataacagattctactttactagtttctctt
cttcagccagcaccggagacatttgagctctttgatgaccttattttaatgtcagaaggg
aagattgtttatcatggtccacgggatcatgtcttggagttttttgaggattgtgggttc
aagtgtcctgagaggaaaggggttgctgatttcatccaagaggtaatctctaagaaagat
caagcacactattggtaccgcatggaacctcacaattatgtctcagttgatatgctctca
aaaaaattaaaggcatcttcttttgggaagaagctagatgaggatcttttagagccattt
gataagcttaaagacaataacaatgctctttcctttagtgtgtattctctttctaaatgg
gaactttttagagcttgttcgtcaagagaacttcttctcatgaagaggaattcttttatc
tatgtattcaagacagttcagattatcatcattgcatttatcaccatgactgtatttctg
aggactcgtatggatattgatgttcttcatgcaaactactacatgggttccctattcttt
gctcttaccatacttctcgtggatggaattcctgagttgtctatgacacttcaaagacta
gaagttttctataagcagagagacctgtgtttttatccagcttgggcttatgcaattccg
gcaacactactgaaagtacctgtttcatttgtggaagccctggtttggacttctcttact
tactatgtcattggatacagtcctgagttccaaaagttcatcctccagttctttctactt
tttgccgttcatttaacatcaatatccatgtttcgcttcctggcatcattctttcagacc
atggttgccgcaatgacagccggtagttttgcaatattgtttctgttactattcagcgga
ttcattatcaaaaaaccttccatgcctggttggttagggtggggattttgggtttcccca
ctgacatatggggagataggcctctctgtgaacgagtttctttctccaagatggcaaaca
atgccatcaacaaacattactatcgggcatgaaacccttgaaagccgtggactaaacttt
gatggatatttctactggatatcacttggtgccttatttggattcacaatgattttcaac
ataggatacatcttgtccttgagtttcttgaagtctcccggatcatctcatggtatcatt
tcacatgaaaagcttgcccaaattcacagaactgatgattccctcgatgatgcccaagtg
aaagaaaagtctagaattcatccttctaaaaccactggcaagatggtcttaccctttact
ccattgacactggttttccaagatgtgcaatactatgttattcctatggaaaccagggag
ccaggatttaatcagaagaaacttcaacttctaagtgacattacaggggcatttagacct
ggtgttcttacagcattgatgggcgtcagtggcgctgggaaaactactcttcttgatgtt
ctggcaggcagaaagactactggctgcattgaaggagacataaagattggtggatatccc
aaggttcaagaaacatttgctagggtattgggttactgtgagcaaaccgatgttcattct
ccacaaatcactgtagaagagtctttgatgttttctgcttggctgcgcctggcttctcag
attgactcaaagacaaaaactgagtttgtcaatgaagtccttgagaccattgaacttgat
ggaataaaagatgccttggttggaatacctggtgttagtggtctatcaaatgagcagcgt
aagcggcttacaattgctgtcgagcttgtttcaaatccctccataatcttcatggatgaa
cctacaactggtttggatgcaagagctgctgcaatagtcatgcgagcagtgaagaatgta
gctgatacgggaagaacaattgtttgcaccatccaccaaccaaatattgatatatttgaa
gcatttgatgagctaattcttttgaaaactggagggcgtatgatctactcaggacaggtg
ggtcagcactcgagtagagttatcgaatattttcagagtattcctggcgttcaaaagatc
aaaagtaactacaatccagctacatggatgttagacatcacttctacatcagctgaagct
gaacatggtattgattttgcccaaatatacagagaatctagtttatatgggaataatata
gagcttgcaagacagttgagtactccacctcctggttccagagatctgcattttgctaca
cgcttttcacaaaatggctggatgcagttcaaatcttgcctatggaagcagcacttgtct
tattggaggagtccgtcatataacttgatgcgcatcatgcatacggttgtatcatctcta
attttcgggacattgtattggaaccaagggaggaaaataaccgaccagcagaacttattc
aatatacttggttctatgtatgccggtgtcatcttcttgggcataaataactgcgcaact
gttctgcaatatgttgccacagagagaactgtcatgtatcgtgaaaaatttgtggggatg
tattcaccattggccttttcggttgcacaggtggtggttgaacttccctatatatttatc
caggcagtcttatttatgatcatcacatatccaatgattgggtattatgcttcagcatat
aaggttttctggtacttctatgccttattttgttcactgctatactacaattacatggga
atgatgctcgtttcgttgacgccaaacttcatggtagctgcaattctatcttcagtgttc
tacacagtgtataacctgtttgctggttttttgattcctaagccgcaaattccgaaatgg
tggatttggttgtattacctgactccctcatcttggtcactaaatggtttgctcacttca
caatatggagacataaacaaggagattatcatatttggggaacccaaaacagtgtctgcc
ttcttgaaagactactttgggtttcaccatgatcagttggctctggtggcactagttctc
attgcatttcccatagcttttgcatctattttcgcctactgtatcggacggttgaacttt
cagaggaggtga
DBGET
integrated database retrieval system
