Rosa chinensis (China rose): 112193165
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Entry
112193165 CDS
T06020
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112193165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112193165
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112193165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
Motif
Other DBs
NCBI-GeneID:
112193165
NCBI-ProteinID:
XP_024189001
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Position
3:complement(29588457..29596496)
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AA seq
863 aa
AA seq
DB search
MATDQNLSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLETLSKKLKAKTLRNEAPQQS
IAATRLLAREGLNAEQLARDLKSFELKTTFEDVFPAEATSIEDYLQQVHEMAMVSAVQEA
QKDNLRSFNDHMLKVLEEDWQMEKRDFLQSLSQISTLPRTNVTYTVSGGSRPGQVASIAS
SPHVSSGPSSMELVPLDSKPILERKASVYAEVVKNLNNARQRSLPFKPATAFKGAYESLG
LHASGGKSVNMQKIWHLLQTLLSEDITIQRSVSKKMSLVIGARRHLEWGHEKYIMDTIQS
HPAQAALGGVVGNLQRIRAFLRIRLRDYGVLDFDAVDSRRQPPVDTTWQQIYFCMRTGYY
DEARSVALSSRASNHFAPLLTDWINTGGMVPAEIATAASEECEKILRIGDRAGRPAYDKK
KLLLYALISGSRRQIDRLLRDLPTLFNTIEDFLWFKLSAVRDCPVGATSIVMNESLVPYT
LEDLQAYLNKFDPSYYTKNGKDPLVYPYILLLSIQLIPAVVYLSQESGDEGYNIDAAHIS
IVLADHGVLSEGAGAGQKMGVMDAYAEASSIIRQYGSAYLRVGNLSMALEYYAQAAAAVG
GGHLSWSGRGNVDQQRQRNLMLKQLLTELLLRDGGVYLLLGSRGAGEEGELRRFLIDVKA
RQQFLLEAAHHCQETGLYEKSIEIQKRIGAFSMALDTINKCLSEAICALSRGRSDGESRT
AGLIHSGNEILEMDKYSSEVSLQERESVLEQQTVLRQLEAILSIHKLARLGHYVDALREV
AKLQFLPLDPRTPDTTTDVFKNLSPHVQVCVPDLLKVALTCLDNMVDSDGLLRALRAKIA
SFIANNSNRNWPRDLYEKLARSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgatcaaaatctgagcagctggaccgatctcctccactcctccaccaagctt
ctcgaacaagccgctccctccgctcagtttccccctcttcagagaaatttggaccagttg
gaaacattatctaagaagctcaaggcgaaaactcttcgaaatgaggctcctcaacaatcc
attgctgccacgaggcttcttgctcgtgagggtctaaacgcagagcagcttgcacgagac
cttaagtcttttgaattgaagacaacatttgaggatgtttttcctgccgaagcaacgagc
attgaagactatctgcagcaggtccatgaaatggcaatggtctcagctgttcaagaagct
cagaaggataaccttagaagctttaatgatcatatgttaaaagttttggaggaggattgg
cagatggaaaaacgtgatttccttcaaagcttaagccagatttcaacattacccaggact
aatgtgacttatactgtcagcggtggtagtcgtcctggtcaagtagcatccattgcttcc
agccctcatgtttcatctggtccatctagcatggagcttgtacccctagatagcaagccc
atccttgagagaaaagcctctgtttatgcggaagttgtaaagaatctcaacaacgcaagg
cagcgcagtttaccttttaagcccgctacagctttcaagggtgcgtatgaaagtttgggc
cttcatgcatctggaggaaaatcagtgaacatgcagaagatatggcaccttcttcagacg
ttgctgagtgaagatataaccatacaacgaagtgtttcaaaaaagatgtcattagttatt
ggtgcaaggcgccacctggaatgggggcatgaaaaatacatcatggatacaattcaaagt
caccctgcacaggctgctcttggaggggttgttggaaatttacaaagaattcgagccttc
cttcggattcgtttaagagattatggagttctagattttgatgcagtcgattcgcggagg
cagcctcctgttgataccacttggcagcagatctacttttgcatgagaactggctattat
gatgaagcaaggtctgttgctttgtcatctcgtgcttcaaaccactttgctcctctgctc
acggactggattaatactggaggcatggtgcctgccgagattgcaactgcggcatctgag
gaatgtgaaaaaattctaagaattggtgatcgtgctggtcgacctgcatatgacaagaaa
aagttgttactgtatgctctcatatctggttctcgtaggcaaatcgaccgcctgctacgt
gatctaccaactcttttcaacactatagaggatttcttgtggttcaaattgtcagctgta
agagactgcccagttggagctacatccattgttatgaatgagagcttagtaccatacacg
ttggaagatttgcaggcttacttaaataaatttgacccatcatattacacaaaaaacgga
aaggaccctctggtatatccatacattctgcttttaagcatccagttgataccagctgtt
gtatacttgtctcaagaatctggagacgagggatacaacattgatgctgcccacatatca
attgtgttagcagaccatggggtcctttctgaaggtgctggagctggacaaaagatggga
gtgatggatgcttatgcagaggcatctagcatcatcaggcagtatggatctgcatattta
cgtgttggtaatctatcaatggcattagaatattatgcacaggctgctgctgcagttggt
ggtggccatttgtcatggtctggaagaggtaatgtggatcagcaaaggcaaagaaatttg
atgctgaagcaactacttacagagctattgttgcgggatggtggggtatatcttttgctt
ggttcaagaggtgctggcgaagaaggtgaactgagacgatttttgattgatgtaaaagca
agacaacaatttctgcttgaagccgctcaccattgtcaggaaactgggttgtatgaaaaa
tccatagaaattcagaaacgaataggggcattctcaatggcattggataccattaacaag
tgcctctcagaagcaatttgtgccttgtcacgtggcagatcggatggggagagtcgaact
gctggtctcattcattctggaaatgagatcttggagatggacaaatattcatctgaagtt
agtcttcaagagagggagagtgttttagagcagcagactgttttaagacaacttgaggcc
atactgtcaatacataagttggcaagactaggtcattatgttgatgctttgagggaggtt
gccaaacttcaattccttcctttagatcctcgaacaccagatactaccactgacgtgttc
aagaatttgagtccccatgtccaagtttgtgttccggacctcttgaaagttgcactgact
tgtctggacaacatggtggattctgatggattactccgagccttgagggctaagattgct
agcttcattgcaaataattccaatagaaattggccacgtgatttgtacgaaaaacttgcc
cggagcttgtga
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