Rosa chinensis (China rose): 112193200
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Entry
112193200 CDS
T06020
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112193200
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
90S particles
Other 90S particles
112193200
Pre-60S particles
Other pre-60S particles
112193200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
GREB1_C
TNP-like_RNaseH_C
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
112193200
NCBI-ProteinID:
XP_024189039
LinkDB
All DBs
Position
3:28652593..28664509
Genome browser
AA seq
1163 aa
AA seq
DB search
MEEEHHHDHHDAEAEPFKDGADICQQLMDRYSKSSAPQHHHLLATAAAMRSILAAESLPL
TPPSYFAATISAIDDMSSQTTDPTAVAALLSFLSLVLPLVPPRSISSAKAGQALSMLVEL
LEREEGRLTMTGVKAVVKCLGALVGFCDLEDWESIKLGLETLLKFSVDKRPKVRKCSQDC
LENVFKSLQSRSVIKEASKLILSMLKGYMPLAVKLSASRTSDGPKNLDVLHMLNVVKLTV
PFLSAKVSSKLLSELNKLLGPRFSELTRHVFQIIEVLFEISRADAIVSKTEETIASLISY
VSLANKNPSDTVMSAATLLKYSIGILHTGESTSWITNLPLICGPVAGLLTSEGRTAAHSS
AILKELISQHVDLSSLLVNENQPFEDEGEDIIKSNALRSICAIFEEGLNSCKGLPNEHLL
DVISALFLKLGKMSHIYMKSIILKLAELMTVASGDKSKVDHLQKCIGTAVIAMGPERLLE
LVPVSLNAGDFTCVNIWLVPILKNYVVGASLAYYMDHIMPLAKSFHLASSKVKKSKTREA
LQGHARDLWGLLLSFCRHPTDMYQNFVPLAEVIVTFLKEDSLMHETVACSLQALVNQNKS
LVNQKISAADATTKPVPELGNIPTYSKKTATKNIKAVAQCSADLLQALVDSFVGSAPEKR
SYLKDAIRCLASVADSSIAKKIFISVLKKFHLMNGRNEFVKVESHTNSLGDEEEHNRSTR
EKNAQRRCVIMELASSLVEGAQEDLIDLIYTFIKHTFETSEEVANREAYYALSRILEEHA
WFCSSRSTELIDLLLGLKCPGDIVSLRSRFACFQTLMIHTLKIDSEVENAKAFLILNEII
VTLKDSHEEKARKTAYDILLNIRSSLRDSSCLISDGPYQKLINMIMGYLSSASPHIKSGA
VSVLSVLVYKDTDICLSIPELVPSLLSLLQGKALEVIKAVLGFVKVLVSCLETRRLQNLL
PAIVTAVLPWSPVSRHHFREKVTVIMEIMFRKCGYAGVELVTPDKYKGFVKGILENRRDN
KKSSKEVATAETDMKQEDSSTNRMENRKRKELGPLPEKNGSMEHRKRKRVKEHINGSPST
DGISSGGGDGLKHAMRSRQSDGTKSFKDHSEISGKTNKENYSKRPTGGRKGKIGKMNTGK
DVTVVRRPGTSAKLFKHKKVGKK
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagcaccaccacgaccaccacgacgccgaggccgagccgttcaaagatggc
gcagacatctgccaacagctcatggaccgctactccaagtcctcggcgccgcagcaccac
cacctcctcgccaccgccgccgcaatgcgatccatcctcgccgccgagtccctccccctc
accccgccctcctacttcgccgccaccatctccgccatcgacgacatgtcgtcccagacc
acggaccctaccgccgtagctgcgctgctgtcgtttctgtccctggtgctcccgctggtg
ccgcctcggagcatctcgtcggccaaggcgggtcaggcgctgtcgatgctagtggagctt
ctggaaagagaggagggccggctgacgatgaccggcgttaaggcggtggtcaagtgcttg
ggggctttggttggcttttgtgatttggaggattgggaatccatcaaattggggctggag
acattgctcaagttctccgttgataaaagacctaaggtccgcaaatgttcgcaagactgt
cttgagaatgtgtttaagtcactccagtcccgcagtgttatcaaggaggcaagcaagttg
atactttctatgctgaaaggttatatgcctttggcagttaagttaagtgcttcgcggact
tcagatggacctaaaaatctagatgtcctacacatgctaaatgtagtgaagcttactgtt
ccctttctctcagcaaaagtcagctcaaaacttctttcagaattgaataaacttctgggt
ccacggttctcagaactcacaaggcatgttttccaaattattgaagtactttttgagatt
tcaagagctgatgccattgtctcaaagaccgaggagactatagcttctctcatctcatat
gtgtctttagcaaataagaacccctcagatactgtcatgtctgcagcaaccttgttaaaa
tattctataggcatactacatactggtgaatcgacatcatggatcacgaatcttcctcta
atttgtggccctgtggcaggtcttttgacttctgagggtaggactgcagcccattcttca
gctattttgaaagagttgattagccaacatgtagatctaagtagtttgttggttaatgaa
aaccagccttttgaagatgaaggagaagatattataaaatcaaatgcattgagatcaata
tgtgctatctttgaggagggtcttaactcttgtaaaggactgcccaacgagcatcttttg
gatgttatatctgctttgttcctcaagctcggaaaaatgtcccatatctatatgaaaagt
attattctcaaacttgctgagttaatgaccgttgctagcggggacaaatctaaagttgac
catcttcagaaatgtattggaactgcagtaattgctatgggacctgagaggctactagaa
cttgtacctgtatcacttaatgctggtgacttcacctgcgtaaacatttggttggtgcct
attttgaaaaattatgttgttggagcatcgttggcatactatatggaccatattatgcct
cttgcgaaatcctttcatctggccagcagtaaagttaagaagtctaaaacccgtgaagct
ctacagggtcatgctcgtgatttgtggggactgctactttctttttgtcgccatccaact
gatatgtaccaaaattttgtccctctggctgaggttatagtaacatttctgaaggaggat
tctttaatgcatgaaactgttgcatgttccttgcaggctcttgtaaatcagaacaaaagt
ctggttaaccaaaaaattagtgctgctgatgcaacaaccaaacctgtaccagagttggga
aatatacccacttattcaaagaaaactgcgacaaaaaacataaaggctgtggcacagtgt
tctgctgatttgcttcaggccctcgtagactcttttgttggttcagcacctgagaagcgt
tcatatttaaaggatgctataagatgcttggcttcggtagctgattcttctattgccaag
aagattttcatatcagtacttaagaagtttcacctcatgaatggtaggaatgaatttgta
aaggtggagagtcatactaattcattgggcgatgaagaagagcacaatcgaagtactaga
gagaaaaatgcacagcgcagatgtgtgataatggaactagcttcttctctagttgaagga
gcccaggaagatcttattgatctaatctatacctttatcaaacacacttttgagaccagt
gaggaggttgcaaatcgtgaagcgtactatgctttgagcagaattctagaggaacatgct
tggttctgttcttcccgctctaccgaattgattgatctgttacttggtttgaaatgtccg
ggtgatatcgtatctctaaggagtcgatttgcttgtttccagactttaatgattcatact
ttgaagatagactcagaggtggaaaatgcaaaggcttttcttattctcaatgagataata
gtcacgttaaaggattcccacgaagagaaagctaggaaaacagcctatgatatactcctc
aacataagatctagcttgagagactcatcatgtctcatttcagacggaccttaccagaaa
ttaattaacatgataatgggatacctttccagtgcatcacctcatataaagagcggagca
gtgtctgtgctatcggtgctggtgtataaagatactgatatttgcctttcaatacctgag
cttgttccttctcttttatctttgctgcaaggcaaagctctcgaagtcatcaaagctgta
ttgggctttgtgaaagtactagtatcttgcttagaaactaggcgtctgcaaaatcttcta
ccagctattgtcactgcagttcttccctggtcccctgtctcgagacatcatttcagagaa
aaggtcacagtcataatggagattatgttcaggaagtgtggttatgctggagttgagtta
gttacaccagataaatacaagggttttgttaagggtattctggagaaccgccgtgataac
aagaaaagttccaaggaagttgccaccgcagaaacagatatgaagcaggaagattcttca
accaacaggatggagaatagaaaacgcaaggaattgggtcctttacctgagaaaaatgga
tcaatggaacatagaaaaagaaaaagggtgaaggaacacataaatggaagccctagtact
gatggtatatcttctgggggtggagatggactgaaacatgccatgagaagtaggcaatct
gatggtactaaatcctttaaagaccactcagaaataagtggaaagacaaacaaagagaat
tacagtaagcgacccacaggtggtcgcaaaggaaagatagggaagatgaatacaggcaag
gatgtgactgtggtaaggagacctggcacttcagccaaactgttcaaacacaagaaagtt
gggaagaaatag
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