Rosa chinensis (China rose): 112193291
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Entry
112193291 CDS
T06020
Name
(RefSeq) protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
KO
K28146
NHL repeat-containing protein 2
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
112193291
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Gene cluster
GFIT
Motif
Pfam:
NHL
Hydrolase
HAD_2
Thioredoxin_8
TEN_NHL
Redoxin
SGL
AhpC-TSA
Hydrolase_like
Thioredoxin
DUF5128
Fn1-VW_OTOGL
HAD
Thioredoxin_2
Motif
Other DBs
NCBI-GeneID:
112193291
NCBI-ProteinID:
XP_024189140
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Position
3:6464129..6474191
Genome browser
AA seq
1091 aa
AA seq
DB search
MAMKLLSPPSSSLSQPTRLFCLHSTSTRPKPISVPTLLFQRTPKRFVFSKRMVVKACVKV
EEKNVQESSGSEWGKVSAVLFDMDGVLCNSEEPSRRAAVEVFAEMGVETTVEDFVPFGGT
GEANFLGGVAAVKGVKGFDTEAAKKRFFEIYLDKYAKPDSGIGYPGALELVTQCKSKGLK
VAVASSADLIKVKANLAAANLPLSLFDAIVSADAFENLKPSPDIFLAASKILDVIPSECI
VIEDALAGVQAANAAKMRCIAVKTTLSEEALMSAGPSIIRNQIGNISLDDILSGGSDGYN
GKMQGLQFLNSSSQTTSEKLTERDTDSSGAANDGIFSFGGVVRRDIVKYGSLGIALSCLA
FTISNWKAMQYTSPNAIWNVIFGVNQPSIAQKEGESKLERIQQFVNYISDLETRGTAPIV
PEFPPKLDWLNTAPIKLSKDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVV
GVHSAKFDNEKDLEAIRNAVLRYNITHPVVNDGDMYLWRELGVNSWPTFAVVGPNGRLLA
QLSGEGRRKDLDDLVEAALLYYGRKKILDNAPLPLSLEKDNDPRLFTSPLKFPGKLAVDV
ENNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFDDATFNRPQGLAYNTKKNL
LYVADTENHALREIDFVNETVHTLAGNGTKGSDYRGGGKGSTQLLNSPWDVCFHPVNEKV
YIAMAGQHQIWQLDTSDGITRAFSGDGYERNLNGSSSSSTSFAQPSGISLSPDMTELYIA
DSESSSIRAVVLKTGGSRLLAGGDPFFSDNLFKFGDHDGMGSEVLLQHPLGVLCTKGGQI
YIADSYNHKIKKLDPDSKRVSTIAGTGKAGFKDGTALEAQLSEPSGIIEATNGRLFVADT
NNSLIRYIDLSNKEPELLTLELKGVQPPTAKSKSLKRLRRRLSADTQTVTVDGGSSNEGN
LYIKISLPEEYHFSKLLSVVMYKFLMQEARSKFSVETEPETAVLVDPSDGYLSPEGSAVL
HFKRSSPSASVGRVNCKVYYCKEDEVCLYQSLLFEVPFHEEIPESNPEEITLAYLVKPRT
STDSLQLPVAR
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaagctactctcaccaccctcctcttctctctcacaacccaccaggctcttc
tgcttacattccacctcaaccagaccaaaacccatttcagtcccaacccttctcttccaa
aggaccccaaaacggttcgttttctccaagagaatggtagtcaaagcttgtgtgaaagtg
gaggagaagaacgttcaagaatcttctggaagtgagtggggcaaggtctctgctgtgctg
tttgacatggatggagttctctgcaatagcgaagagccttctagaagggccgcagtcgaa
gttttcgccgaaatgggggttgagaccacggtggaggactttgttcctttcggaggaact
ggtgaagcgaattttttaggaggtgtcgctgctgttaagggggtaaagggattcgatacc
gaggcagcaaagaagagattctttgagatatatttggataagtatgcaaaaccagattct
ggaataggataccccggtgcccttgaacttgttactcagtgtaaaagcaaaggccttaag
gttgctgttgcatccagtgctgatctaatcaaggttaaggcaaatctagctgctgccaat
ttaccactttcattgtttgatgctattgtgtcagcagatgcttttgagaatctgaaacct
tctcctgatatattcttggctgcatcaaagatcttggatgtaatccctagtgagtgtatt
gtaattgaggatgcactagctggagtgcaggctgccaacgctgcaaaaatgagatgtata
gctgtgaaaactactctatcagaagaggctctaatgagtgctggtccatccattattcga
aatcaaataggaaatatttcactcgatgatattctcagtggtggctctgatggctataat
gggaagatgcagggacttcaatttcttaattcttcatctcaaaccacatcagaaaagctc
acggaaagagatactgattcttctggtgctgccaatgacggcattttctcgtttggaggg
gttgttcggcgagatatagtgaaatatggaagcttggggattgctttgtcttgtcttgcc
ttcaccatatcaaactggaaggcaatgcaatatacatcacctaacgctatttggaatgtg
atatttggggtcaaccagccatctattgcacagaaagaaggtgaatcaaagttggaaaga
atccaacaatttgtgaactatatatctgacctggaaaccagaggaactgctcctattgtg
ccagaatttccaccaaaacttgattggttgaatacagctcccatcaagttaagcaaggat
ctcaaaggaaaagtggttgtgctggacttttggacctattgctgtataaattgtatgcat
gtactgccagacctggagtttttggagaaaaaatacaaagatatgccgttcactgtggtg
ggagttcattcggcaaagtttgataatgagaaggatttagaggccattcggaatgcagtg
ttacgctataacatcactcatccagtagtcaatgatggagatatgtatctatggagagag
ctaggtgtgaattcatggccaacttttgctgttgttgggcccaatggaagacttcttgct
caactatcaggtgaaggtcgccgcaaggatcttgatgatttggtggaggcagctcttttg
tactatggccgaaagaaaatattggacaatgcaccacttcctttgagtttggagaaagat
aatgatccccgtctgtttacatctccattaaagtttcctggaaagctggcggttgatgtc
gaaaacaataggctcttcatttcagacagtaatcataaccgcatagttgtaaccgaccta
gatggaaattttattgtccaaattggaagtacaggagaggaaggtctacgtgatggttct
tttgatgatgccacctttaatcggcctcagggcctggcttacaatacaaaaaaaaatctt
ctctacgtcgcggatactgaaaaccatgcgttgagggagattgactttgttaacgaaaca
gtgcatactctagctggaaatggaaccaaaggctctgattacagaggaggaggaaaagga
agcactcagctactcaactctccatgggatgtctgctttcatccggtcaatgagaaagtt
tatattgccatggctggccaacatcaaatttggcaacttgatacatctgatgggattact
agagcatttagtggtgatggttatgaaagaaatctgaatggatcaagctcttcaagcaca
tcatttgcacagccttctggaatttcattatctcctgatatgacggagctgtatattgct
gatagtgagagtagctccatcagggcagttgttttaaaaacaggaggatcgagattgcta
gcgggtggtgatccatttttctcagacaatttgtttaagtttggggaccatgatggaatg
ggttctgaagtacttcttcaacatccactcggtgtcttgtgtacaaagggcggtcaaatc
tatatagcagatagctataatcacaagataaagaagctagatccagatagtaaaagagtt
agtaccatagcagggacagggaaagctggtttcaaggacggaacagctcttgaagctcag
ctttcagagccatcaggaatcattgaagcgacaaatgggagactcttcgtagccgataca
aacaacagtctaatcagatatattgacttaagcaacaaggaacctgaacttcttactctg
gagctaaaaggggttcaacctcccacagcaaaatccaagtctttgaaacgcctcagaagg
cgcttatcagctgacacacagaccgttacagttgatggtggttcatccaatgaggggaac
ctctatattaaaatatcattacctgaagagtatcatttttcaaagcttttgtcagttgtc
atgtataaatttttaatgcaggaagctcgcagtaagtttagtgttgaaactgagcctgaa
actgcagttctcgttgatccctcagatggatatcttagtccagaaggatcagcagtactt
cattttaagagatcctctccctcagcttctgtggggagagttaattgcaaggtttactac
tgcaaagaagatgaggtctgtttataccaatccttattatttgaggtaccattccatgag
gaaattccagaatccaacccagaagaaatcacacttgcctaccttgtaaagcccagaact
tcaacagacagcttacagctaccagttgcacgctga
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