Rosa chinensis (China rose): 112193385
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Entry
112193385 CDS
T06020
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112193385
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
112193385
Transfer RNA biogenesis [BR:
rcn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
112193385
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
PepSY_2
FAD-oxidase_C
Motif
Other DBs
NCBI-GeneID:
112193385
NCBI-ProteinID:
XP_024189292
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Position
3:12903435..12910919
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AA seq
791 aa
AA seq
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MAVRAVSTCSIFRSASSPTLFAFRCCPCHFQFRRFSKLGIRFPLFWSDKPSPGHGGAQRS
SVHSLVDSVMEELQFLRTKRVRASAKVELTSSGEILEDKLVNRTLQKGVLLEFKKDAERV
LLAVAQKPDGKKNWMVSDQNGVTSSIKPQQITYIVPGVENFDHAEISDFIQKARENLDPA
LLEFAWVELLEKNKRVKVEELAEMIFGSVESLECYCAHLLLSGDEIYFTVLETKGSRSIY
GPRSAEQVEELLRRKLAKEAAEKEQQEFVTLLKSAKAMPLDAKPPKSSWMVEEKIKHRIE
SLECYAIDDCKTDDQRKTAGTILKAMGMVKTASSALNLLIDIGYFPVHVNLDLLKFNIHT
DHSDEVISAAESLLLDPSDPDEIERKDLTHLKVYAIDVDEADELDDALSATRLQDGHIKI
WIHVADPTRLVQPGSILDREAMRRGTSVFLPTATYPMFPEKLAMEGMSLQQGEICSAVTV
SVVLHSDGSIAEYSVDNSIIRPTYMLTYESASELLHLNLEEESELKMLSEAATLRKKWRR
EQGGIDTATLEARIKVVNPEDPEPVINLYVEDQAEPAMRLVSEMMILCGEVIATFGCSNN
IPLPYRGQPQSNIDTSVFAHLPEGPVRSSALVKIMRAAEIDFRKPIRHGILGLPGYVQFT
SPIRRYLDLLAHYQIKAFLIGDSPPFSAGQLEGIASIVNMNTRVAKRLFNSSLRYWILEY
LRRQPKEKRFRALILRFIKDRIAAILLVEVGLQASVWVSVGSQIGDEILVRVEEAHPRDD
VLFLKEVVIDR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcgagccgtcagcacctgctcaatcttccgctccgcctcttcccctactctc
ttcgccttccgctgctgcccgtgccacttccaattccgccgcttctccaaattaggcatc
cgcttcccgctgttttggtccgacaagcccagtcccggccatggcggcgctcagagaagc
tccgtccacagcctcgtcgatagcgtcatggaagagctccaattcttgcgcacaaaaaga
gttcgcgcctccgccaaggtggaactcacaagcagtggagagatactagaggataagctt
gtgaaccgaacactgcaaaaaggggtgctgcttgagttcaagaaggatgcggaacgagta
ttgctggctgttgctcagaaacccgatggcaagaagaactggatggtgtccgatcagaat
ggtgttacatcatccatcaaaccacaacaaattacatatattgttcccggtgttgaaaat
tttgaccatgcagagatttcagactttattcagaaagctcgggaaaacttggatccagca
ctgctagaattcgcttgggttgaactccttgaaaagaataagcgggtgaaggtagaagaa
ctagcagagatgatatttggtagtgtggagtccctagaatgctactgtgctcatcttttg
ctttcaggagacgaaatatacttcactgtcctagagacgaaaggttctcgctctatatat
ggacctcgatctgctgagcaggttgaggaacttctacgtaggaagcttgcaaaggaggct
gctgagaaagagcagcaggagtttgtaaccctgctgaaatctgcgaaggctatgccttta
gatgctaaacctcctaaatcttcttggatggttgaagagaaaatcaaacacagaattgag
tctcttgaatgttatgctattgatgactgcaaaaccgatgaccaaaggaaaacagctgga
acaatcttaaaggcaatgggtatggtgaaaacagcatcatcagctctgaatctcctcata
gatattgggtatttccctgtacatgtgaatctggacttgttgaagttcaacattcatacg
gatcattcagatgaagttatatcagctgcagagagtcttctgttagatccatcagatcca
gatgagattgaaaggaaagatctcactcacctgaaggtctatgccattgatgtggatgag
gctgatgagcttgatgatgccttgagtgcaacgaggctgcaagatggacacattaaaata
tggattcatgttgcagacccgactaggcttgttcaacctgggagcatactagacagggag
gctatgagaagaggaacttccgtcttcttgcccactgctacttatcccatgttcccagaa
aaacttgccatggagggaatgagtttgcagcaaggagagatttgcagtgctgttacagta
tctgttgtgctgcactctgatggcagtattgcagaatattcagtggacaactccatcatc
agaccaacatatatgctaacgtatgagagtgcatctgagcttcttcatttgaacctggaa
gaagagtctgaactaaaaatgttgtctgaggccgcaactctccggaaaaaatggcgtcgt
gaacagggtggcattgacacagccacattggaagcacgcataaaagttgtgaatccagag
gatccggagcctgtaataaatctctatgttgaggaccaggctgaacctgcaatgcgactg
gtctctgagatgatgatactctgtggagaagttatagctacttttggttgtagcaataac
attcctttaccatacaggggacagccccaatccaacatcgacacatctgtatttgcccat
cttccagaaggacctgttagaagctctgcccttgtcaaaataatgcgtgctgctgaaatt
gatttcaggaaacctatacgccatggaattttaggacttcctggttatgttcagtttaca
tctcctatccgcagatatctggatctactagctcactatcagatcaaagcatttcttatt
ggagattctcctcctttctcagctggtcagttggaagggatagcgtctatagtgaacatg
aatactagagtagcaaagcggctctttaacagcagtctgcggtattggatattagaatat
ttgagaaggcagccaaaagaaaaaagatttcgtgcattgattcttagattcattaaggat
cgcattgcagccatactgttagttgaggtgggacttcaagcatctgtgtgggtgtctgtg
ggatcacaaattggagatgaaattctagttcgggtagaagaagctcatccacgtgatgat
gtgctttttctcaaagaggtggtcattgatagataa
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