Rosa chinensis (China rose): 112193425
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Entry
112193425 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112193425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112193425
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
112193425
INO80 complex (yeast)
112193425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
112193425
NCBI-ProteinID:
XP_024189341
LinkDB
All DBs
Position
3:30202915..30213891
Genome browser
AA seq
1507 aa
AA seq
DB search
MDHRRQSKDSLSSSYSNLFNLEPLINFQLPQPDDDFDYYGNSSQDESRGSQGGAAGNGIM
SDRELNSVKKRRRSQNSDYEEDDSYYGTHITEDKYRSMLGEHIQKYKRRFKDSPSSPAPI
QMGIPVSKGNKGSKSRKLANENRGGFYELETTSEWLNDTIPQKPGNYHDADFAPQSAADR
VIYEPPYLDIGDGFTYKIPPIYDKLVTSLHLPSFSDFRVEEVYLKGTLDLGSLAEMMGSD
KRFGPKNRAGMGEPYPQYESLQARLKALSTSTSAQKFSLKVSDIGLNSSIPEGAAGSIKR
SILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKVQKDPSQIEKEEMERMGRVWVNIVR
RDIPKHHRMFTTFHRKQLIDAKRVSENCQREVKMKVSRSLKVMRGAAIRTRKLARDMLLL
WKRIDKEMAEVRKKEEKEAIEMRKRLEEEREAKRQEQRLNFLIKQTELYSHFMQNKLSSQ
PSEDLPVGDENQDVSPSSSDIENVEEDSEEAELKKEALKAAQDAVSKQKKLTSAFDDECL
RLREASEPEAPQDVAGANNIDLHNPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYE
QGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLK
TLPYWGGLQERMVLRKKINAKKLYRRDAGFHILITSYQLLVGDEKCFRRVKWQYMVLDEA
QAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFS
KGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKTDVISELTRKTEVTVHCKLSSRQQAF
YQAIKNKISLAELFDNNRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSTYLHFGEI
SNSLLPPPFGELEDVHYSGGQNPITYEVPKLLYQEILQNSETFCSAVRHGVYSESFQKHF
NIFSPQNVYRSIFLQENDSDELSVGSGTFGFTHLMDLSPAEVAFLGTGSFMERLMFSIMR
WDRQFLDGLIDTLMETMDDDSECSFLESGKVRAVTRMLLMPSRSITTIFQKKLATGPGGT
PFEGLVVSHRDRLLSNIRLLRSTYTFIPRTRAPPVNAHCSDRNFTYKMSEEQQYPWVKRL
FSGFARTSDYNGPRNXETPHHLIQEIDSELPVSHSALQLTYRIFGSCPPMQSFDPSKMLT
DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD
MVRDFQQRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD
VTVYRLICKETVEEKILQRASQKNTVQQLVMMGGHVQGDLLAPEDVVSLLLDDVQLEQKL
REAPSQVKDRQKKKQTKGIRVDAEGDASLEDLTNTAASQGTGNEESPDVERSKSNNKKRK
TVPDKHTPRPKNPQSMDEPEGYELEDSLQNTDPQGTRPKRPKRSKKSVNETLEPAFTAAS
PVVPRQT
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggaccacaggcgccagtccaaggattctctctcctcctcctactccaacctcttcaat
cttgagcctttgataaactttcagcttccacagccagatgatgattttgattattacggc
aatagcagtcaggatgagagcagaggtagccaaggtggagctgctggtaatgggatcatg
tccgaccgcgaactgaattcagtaaagaaaaggaggcggtctcaaaacagtgattacgag
gaggatgacagttattacgggacgcacattacagaggacaagtatagatcaatgcttgga
gaacacattcagaagtacaaaaggaggttcaaggattccccgtcaagtcctgcaccaatc
cagatggggattccggtttcaaagggtaataagggttcgaaatcgaggaagctggcgaat
gagaaccgaggagggttctatgaattggaaaccacgtctgagtggctcaatgataccatt
cctcagaaaccagggaactaccatgatgctgattttgcgccacaaagtgccgctgataga
gtaatatatgaacctccttatctggatattggagatggtttcacatacaagattccacca
atttatgataaactggtgacatctttacacttgccgagcttttctgattttcgggtggag
gaagtttacttaaaaggtacattggatttgggatccttagcagaaatgatgggtagcgat
aaaaggtttgggccaaaaaatcgggcgggaatgggggagccctatccccagtatgagtcc
cttcaggcaagattaaaggccttgtccacttctacctctgctcaaaagttcagcctcaaa
gtttctgatattgggttgaattcctccatcccagagggggcagctggaagtataaagagg
tctattttgtccgagggtggtgtcttgcaagtctactatgtgaaggttttggagaaggga
gacacatatgagataattgaacgaagcctacccaagaagcaaaaggtacagaaagatcct
tctcagattgagaaggaggaaatggaaaggatgggaagagtttgggtaaacattgtaaga
agagacataccaaagcatcatagaatgtttactacttttcaccgcaagcaactaattgat
gccaagagggtctcagagaactgtcaaagagaggtaaaaatgaaggtaagtagatcactt
aaagtgatgaggggtgctgcaattcgcacaaggaaactagccagagacatgttactgctt
tggaagagaatagacaaagagatggcagaagtgaggaagaaagaggaaaaagaagctatt
gaaatgcgcaagcgtctggaggaggaaagagaagcaaagagacaggagcaaagactcaat
tttctcataaaacaaaccgaactttacagtcacttcatgcagaacaagttgagttcacag
ccatctgaagacttgcctgtaggagatgaaaaccaagatgtatctccaagctcctcagat
attgagaatgttgaagaagattctgaggaagctgaactgaagaaggaggcattaaaagct
gctcaagatgcagtttcaaagcagaaaaagttaactagtgcatttgatgacgagtgtctg
aggctgcgtgaagcctctgaacctgaggcaccacaggatgttgctggagctaataacatt
gatctgcataacccttccactatgcctgttacatcaaccgttcagacacctgagttgttc
aaaggctcccttaaagaataccagctaaaaggcctccagtggctggttaattgttatgag
cagggtttaaatggcatccttgctgatgagatgggcctgggtaagaccatccaggccatg
gcatttttggctcatttggctgaggagaaaaatatatgggggccttttctggttgttgct
cctgcttctgtcttgaacaactgggctgatgaaattagtcgtttctgccccgacttaaaa
actcttccgtattggggtggccttcaagagcgtatggtacttaggaagaagatcaacgct
aagaaactttaccgtagggatgctgggtttcacattctcattaccagctaccagttgcta
gtgggtgatgagaagtgtttccggcgtgtgaaatggcaatatatggtattggatgaagca
caagctatcaaaagttctaacagtataagatggaagacactgctcagctttaattgtcga
aatcgtttgctgcttactggtacacctatccagaataatatggcagagttgtgggcccta
ctacatttcattatgccaaccttatttgacagtcatgaacaattcaatgagtggttctct
aaaggaattgaaaatcatgcggaacatgggggtactttgaacgagcaccagcttaacaga
ttgcattcgatattgaagccattcatgctccgtcgagttaagacagatgtgatttctgag
ctgaccaggaaaactgaagttactgtgcactgcaagttgagttctcggcaacaagctttt
tatcaagctatcaaaaacaagatatctcttgctgagctgtttgacaacaatcgtgggcat
cttaatgagaagaaaattttgaacttaatgaatattgtcattcagctaagaaaggtctgc
aaccatcctgagttatttgagaggaatgaaggaagcacatatcttcactttggtgagatt
tcaaattctcttcttcctccaccatttggggagttggaggacgtacactactcgggaggt
caaaatcctataacatacgaggtccccaaacttttatatcaagaaatactccagaattct
gaaacgttttgctctgcagttcggcatggtgtctacagtgaatcttttcagaaacatttt
aacatattttcaccgcaaaatgtgtatcgatcaatattcttgcaagagaatgactcagat
gagttgtcggttggaagtggaacgtttggttttactcatctgatggatctgtcccctgca
gaggttgcatttttaggaactggttcttttatggagcggctaatgttttccattatgaga
tgggaccggcagtttttggatggattgatagacacactaatggaaaccatggatgatgat
tctgaatgcagcttccttgagagtggaaaagtgagagctgttacacgtatgttgctgatg
ccttcaagatctataactaccatctttcagaagaaattggccactggacctggtggtact
ccatttgagggtctagttgtctctcatcgggacaggcttctctctaatattaggcttctc
cgttcgacatacacattcatcccccgaactagagctcccccggttaatgcccattgctca
gatcgaaacttcacttacaaaatgagtgaagaacaacagtacccctgggtgaagaggttg
ttttctggttttgcgcgaacatctgactacaatggacccagaaacnctgagactcctcat
catctgatacaagagattgattctgaactgcctgtttcacattcagctcttcagttgaca
tacagaatttttgggtcttgtcctccaatgcaaagcttcgacccgtcaaaaatgctcact
gattcgggaaaacttcagacacttgatatattgttgaaacgcttgagggcagaaaatcat
cgtgttctcttgtttgcacagatgacaaagatgctgaatattcttgaggactacatgaac
tacaggaaatatagatacctcagactcgatggatcttccaccattatggatcgtagagac
atggtcagagacttccagcaacgaagtgatatttttgttttcttgctgagtacaagagct
ggtggactaggcattaacttgacagctgcagatactgtcatattttatgaaagtgattgg
aatccgaccctggatctacaggcaatggatagagctcatcggttgggccagacaaaagat
gttactgtctaccgcctaatttgtaaagaaacggttgaggagaagattctgcaaagagca
agtcagaaaaatactgtgcagcagcttgtaatgatgggtggtcatgttcaaggtgacctt
ttggctcccgaggatgttgtatctctacttctcgatgatgtccagttggagcagaaatta
agagaagctccatcacaggttaaggatagacaaaagaagaaacagacaaagggtatacgg
gtagatgcagaaggtgatgcctctttggaagatttaacaaacactgctgcatcacaaggt
actggaaatgaggaatctccggatgtcgaaagatcaaaatccaataataaaaagaggaaa
acagtgcctgacaagcatactccgcggccgaagaatcctcaaagtatggatgaaccagag
ggctatgaattggaggattccttacaaaatactgatccacaaggtacaagacccaagagg
ccaaagaggtcaaagaagagtgtaaatgaaactcttgaacctgcatttacagcggcatcc
cctgtggtcccgaggcagacctga
DBGET
integrated database retrieval system
