Rosa chinensis (China rose): 112193643
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Entry
112193643 CDS
T06020
Name
(RefSeq) long chain acyl-CoA synthetase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00061
Fatty acid biosynthesis
rcn00071
Fatty acid degradation
rcn01100
Metabolic pathways
rcn01212
Fatty acid metabolism
rcn04146
Peroxisome
Module
rcn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112193643
00071 Fatty acid degradation
112193643
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112193643
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcn01004
]
112193643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112193643
Enzymes [BR:
rcn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112193643
Lipid biosynthesis proteins [BR:
rcn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112193643
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of breast milk
112193643
Exosomal proteins of breast cancer cells
112193643
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112193643
NCBI-ProteinID:
XP_024189631
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Position
3:34225130..34230211
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AA seq
670 aa
AA seq
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MKIFSAQVEEGREGQNGKPSVGPVYRNLLSKNNFPPPHPDISTGWDLISQSAQKYPGNRM
LGWRKIVDGKIGPYVWKTYKEVYDELLLVGSALRASGVEPGSRIGIYGSNCPQWIMAMAA
CCAHSLICVPLYDTLGPGAVNFIIDHAEVDVVFVQDKKVKELLKPECTSIQRLKVMVCFT
SLTDEEKDKAAHIGIKPYSWNEFTEMGIQNPSKIFPPLPENISTIMYTSGTSGAPKGVVI
THENMAYGVRGIDLFLEQFEDKMTVDDVYLSFLPLAHILDCVIEMYFFRNGASVGYYHGD
LNALGDDIMELKPTLLAGVPRVFEKIHEGIKKGVQQLNPRRQKIFDILYRYKLAWMNMGF
KNKNASPLADLLAFRKIKNRLGGRIRLIISGGAPLSSEIEEFLRVTCCCFVLQGYGLTET
VGPTTLGFPDEMCMIGAVGTVSVFNELRLEEVPEMGYNPLGDPPCGEICLRGKTVFSGYH
KSPELTREAIKDGWFHTGDIGQILPNGTIKIIDRKKNLIKLSQGEYVALEYLENVYGISS
VIDDIWVYGNSFKSKLVAVVVAEEESTKRWAYLNGHIGSFSDLCFLDQLKSHILEELKST
AEKNKDDFLVSFVFNQLRGFEYIKGIIVEPRPFDMERDMVTATLKKKRNQLLKYYQARLD
ELYQNLDAGQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttctctgctcaagttgaggaaggaagggaaggccagaatggcaagccttcc
gttggtccggtataccggaatttactgtccaaaaacaattttcctccacctcatcccgat
ataagtacaggctgggatctcattagtcaatctgctcagaagtatcctggaaatcgaatg
cttggatggcgtaaaatagttgatggaaagattggaccttatgtttggaaaacatacaag
gaggtttatgacgaacttcttcttgttggttctgcattacgagcatctggtgtggaacca
ggttcccggattgggatctatggttcaaattgcccccagtggattatggcaatggcggct
tgttgtgctcatagtttgatctgtgtgcctctctatgataccctagggccaggagctgta
aattttatcatagatcatgcagaggttgatgttgtttttgtccaagataagaaagtgaaa
gaactactgaagcctgaatgtacatccattcaaagattaaaagttatggtttgcttcact
tcgttgacagatgaagagaaggataaggcagcacacattgggataaaaccatactcatgg
aatgagttcacagagatgggaattcaaaacccatcaaagatctttccacctctgcctgag
aatatcagcacaattatgtacacaagtggtaccagtggagctcctaaaggtgttgtgata
acacatgaaaacatggcatatggtgtcagaggcattgacctctttttggaacaatttgaa
gacaagatgacagtggatgatgtgtatctatctttccttcctctggctcatatcctggac
tgcgtaattgagatgtattttttccgcaatggtgcttctgttggctactatcatggggat
cttaatgcattaggggatgatataatggagttgaagccaacacttcttgctggggtacct
cgagtcttcgagaaaatacatgaaggtataaagaaaggagtccaacagctcaatccaagg
aggcagaagatttttgacattctctacagatacaaacttgcttggatgaacatggggttt
aaaaacaaaaacgcctcaccactcgctgatctgttagccttcagaaagataaagaatagg
ctgggtggtagaattcgtcttataatatcaggaggtgcacccttaagctctgagattgaa
gaattcttgcgagttacttgctgttgtttcgtactccaaggctatgggttgacagaaact
gttggcccaactactctcgggtttcctgatgaaatgtgtatgattggtgctgttggtacc
gtatctgttttcaacgagctgcgcctcgaagaggttccagaaatgggctacaatccactt
ggggatcctccttgtggtgagatatgcttgagaggaaagactgttttttctggctatcac
aaaagtcctgaattgacaagagaagcaattaaagatggatggttccatacaggggacata
gggcaaatacttccaaatggaaccatcaagatcattgataggaaaaagaatctgatcaaa
ctctcgcaaggagagtatgttgcacttgagtacttggaaaatgtatatggcatttcatct
gttattgacgatatctgggtatacgggaatagcttcaagtcgaagcttgttgccgtggtg
gtagcagaagaagaaagcacgaagaggtgggcttatttaaatggtcacattggttcattt
tctgatctttgttttcttgatcagctcaagagccacatcctggaagaactcaagtcaaca
gctgagaagaacaaggatgatttcttagtttcctttgttttcaaccagctgagaggtttc
gagtatataaaaggaatcattgttgagcctcgccccttcgacatggaaagagacatggtg
actgcaactttgaaaaagaaaagaaatcaattgctcaagtattaccaggctagacttgat
gagctctaccaaaatctggacgctggacagtaa
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