Rosa chinensis (China rose): 112193663
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Entry
112193663 CDS
T06020
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112193663
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112193663
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112193663
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
RING_ZNF598
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
112193663
NCBI-ProteinID:
XP_024189654
LinkDB
All DBs
Position
3:6993488..6998208
Genome browser
AA seq
824 aa
AA seq
DB search
MDDSCAVCAETLQWVAYGPCGHREVCSTCTIRLRFICGDSHCCLCKSESKIIFVTKALGD
YTRMINDFSVLPTPLMEGQLGPYWYHEGTQAFFDDVDHYKMIKTMCRLSCSLCNKINEQR
SEGLKKKGEFKNVEQLKSHLFHRHRLFMCSLCLEGRKIFICEQKLYTKAQLDRHTETGDS
EVDGSESERGGFNGHPMCEFCKNPFYGDNELYMHMSTEHFTCHICQRQRPGQYEYYSNYD
NLEIHFQQAHFLCKDDACLTKKFVVFATESEMKRHNAKEHGGNMSRSRRNAALQIPISFR
CRRSNEEDHHGPHSGGHVSDVDAEDNRLFLTVQASVDTANAERFRNTSSSVQAVFDRRRA
SDSVIIAGRFESLATTETESSVRCSNASRENSRNVLAEESAFPPLPLAQSSRRQKFRNGS
ERMDGSTMASRVRRLNTVNVLNSSSAWPTARRQPKSSASSSHQLSSSSSSVFSQSNTATI
NRTMPSGYASSGPVRQAAANGFVSSNFLSTGKSPSTSKVGHSTSAPSLVERGSIDSDFPT
VSATQTNREPANSQTIMPKVGDVQTANKSLVEKIRDALEFDESKFTAFKEISGKYRKDLI
NTGEYLACVDQFGLSHLVLELAQLCPDAEKRRELVETYNFNMKSSRSHGINLSIGGGKSK
SSSKKGKEKCVDNGISSSKDALKLNCKPSAEDAAVVLKNDHCCSKGKSKISVEDEQINLD
SGNHMPMGQNGSQSAGGSSKKNLGKGANKQQKKVPKFLRNRLGDDAVALAELGDAETGPD
LIEEKTDTDKDPPEGLPVRGVWQNGGGHRLVKLTMRNPPKRGVV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagctgtgctgtctgtgcggagacacttcaatgggtcgcatatggtccctgt
ggccatcgagaggtctgctccacctgcaccattcgcctccgtttcatctgtggagattcc
cattgctgcctctgcaagagtgaatctaagatcatctttgtcaccaaggcgttaggcgac
tatacaaggatgataaatgatttttctgttttgccaactcctctaatggagggtcaactt
ggaccatactggtaccatgaaggaacacaagccttttttgatgatgttgatcactacaag
atgataaagaccatgtgcaggctatcctgtagtctttgtaataagattaatgaacaaagg
agtgaggggttgaagaaaaaaggggaatttaaaaatgttgagcagctgaaaagtcatttg
tttcatcggcataggctgtttatgtgcagtctatgcttggagggaaggaagatatttatc
tgtgagcaaaagttatatactaaagcacaattggatcggcatacagagacaggtgattca
gaggtagatggcagtgagagtgaaagaggtgggtttaatggacaccctatgtgtgagttt
tgcaagaatccattttatggagataatgagctgtacatgcatatgtctaccgagcatttt
acttgtcatatatgccaaaggcagcgtccaggacagtatgaatactacagtaactatgac
aacttggagattcattttcaacaagcgcacttcttatgcaaggatgatgcctgcctaaca
aaaaaatttgttgtttttgcaactgaatctgaaatgaagaggcataatgccaaagaacat
ggagggaacatgtctcgctcccggcgtaatgctgctcttcagataccaataagcttccgg
tgtaggagaagtaatgaggaagatcatcatggaccccatagtggaggacatgtttctgat
gttgatgctgaagataatcgacttttcctgactgttcaagctagtgttgatacagccaat
gcagaaaggtttcgtaatacatcctctagtgtccaagcagtttttgatcgtcgaagagca
agtgactctgtgattattgctggccgttttgagtcattagctactacagaaactgagtca
tctgtaagatgctctaatgcatcaagagaaaactctcgtaatgtactagcagaagaatca
gccttccctccacttcctctggctcaaagtagcaggcgacagaagtttagaaatggttcc
gaacggatggatggtagcacaatggcatctcgagttcgtcgccttaataccgtaaatgtc
cttaattcttcttcagcttggccaacagccaggcgccaacctaaatcatctgccagtagt
tctcaccagttatcatcatctagttcttctgtattttcccagagtaatactgcaactatt
aataggactatgccttctggatatgcaagctctggtccagtgagacaagctgcagctaat
ggttttgtatcatccaattttcttagcacagggaagtcacctagcactagtaaggttggc
cactctacttcagctccaagccttgttgagagaggatctatagactctgattttcctact
gtatctgctactcaaactaatagagaacctgcaaatagtcagacaataatgcccaaggtc
ggagatgttcagactgccaacaagtcccttgtagaaaaaatccgtgatgctttagaattt
gatgagagcaaattcaccgcatttaaagaaatatctggaaagtaccgcaaggatctaatc
aacaccggggaatatctggcctgtgtggaccagtttggcctgtcacacttggttcttgag
ctagctcaactgtgtcctgatgctgagaagcgaagagagcttgttgagacttacaatttc
aatatgaagagcagtcgttctcatggaatcaatttgagtattggtggtggcaagtcaaag
agcagttccaagaaaggcaaggaaaaatgtgtagataatgggatcagtagttcaaaagat
gctttgaagttgaattgtaaaccttctgccgaagatgcagcggtcgtattgaagaatgat
cattgctgcagcaaaggaaagtcaaagatatcagttgaggatgaacagatcaacctggat
tctgggaatcatatgccgatgggtcagaatggttctcagtcagctggtggcagctcaaag
aaaaatttggggaaaggagctaataagcaacaaaagaaggttcccaagtttcttagaaac
cgtcttggtgatgatgctgtagcacttgcagaacttggtgatgctgaaaccggtcctgac
ctgattgaagaaaaaacagatacagacaaggatccccccgaagggttgccagttcgtggt
gtttggcaaaatggaggtggccatagacttgtgaaattgaccatgagaaaccctccaaaa
cgaggagttgtctga
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