Rosa chinensis (China rose): 112193859
Help
Entry
112193859 CDS
T06020
Name
(RefSeq) serine--tRNA ligase isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112193859
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112193859
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112193859
Enzymes [BR:
rcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
112193859
Amino acid related enzymes [BR:
rcn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112193859
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112193859
Prokaryotic type
112193859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
HDA2-3
nSTAND_NTPase7
Csm1_N
Motif
Other DBs
NCBI-GeneID:
112193859
NCBI-ProteinID:
XP_024189873
LinkDB
All DBs
Position
3:4660874..4664979
Genome browser
AA seq
484 aa
AA seq
DB search
MLDINLFREEKGNNPQIIRESQKRRFKSVEIVDEVILLDKEWRQRQFELENLRKEFNKIN
KKVAQLRISGQDATEVIKDTDENKKLTAEKEVEVREALNLLNSKLEIIGNLVHDSVPIHD
DEANNAVVRSWGEKRMEPKLKNHVELVELLGIADLKKGAEVAGGRGFYLKGAGVRLNQAL
INFGLDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAYHVDDWIHPTQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCMTSPNGQD
SWEMHEEMIKNSEDFYQQLNLPYHVVSIVSGALNDAAAKKYDLEGWFPASQTYRELVSCS
NCTDYQSRKLEIRFGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVL
RNFMGGVSFLPFKNKPAPEVKGPRKPVQLNQAGSQFTSTMKLFQKPFFNLVRGLGLQKLS
LLLK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatcaatcttttcagagaagagaaaggcaacaacccccaaatcatccgcgaa
tctcagaagcgtcgtttcaaaagcgtcgagatcgtcgacgaggtcatcctgctcgataaa
gaatggcgtcaacgtcaattcgagctcgagaatctccggaaagagttcaacaagatcaac
aagaaagttgctcagctcaggatctcaggtcaggatgcaaccgaggtgattaaggacaca
gacgaaaacaagaagttgactgcagaaaaagaagttgaagttcgagaggctttaaacctt
ttgaattcaaaattggaaatcattggaaaccttgtgcatgatagcgttcccatccatgat
gatgaggccaataatgctgtggttagatcgtggggtgagaaacggatggagccaaaactc
aaaaatcacgttgagcttgttgagcttctgggtattgctgacttgaagaaaggtgctgaa
gtagcaggaggtagaggtttctacttgaaaggtgctggcgtccgcctcaatcaagctctg
ataaattttggtcttgatttccttgagaaaaggggatacacagcattgcagactccattt
tttatgagaaaagatattatggcaaagtgtgctcaattagcacaattcgatgaggagctg
tataaggtaaccggagagggtgatgacaaatatctgattgctacagctgaacagccactt
tgtgcatatcatgtggatgattggattcatcctacacagctgcccataagatatgctgga
tattcatcgtgtttccgcaaggaagctggttcacatggtcgagataccttgggaattttc
agagttcatcagtttgaaaaagttgaacagttctgtatgacaagcccaaatggccaggac
tcttgggaaatgcacgaggaaatgatcaaaaactctgaagacttttatcagcagctcaac
ctcccttatcatgttgtgtccatcgtttctggtgctttgaatgatgcagcagcaaagaag
tatgatctcgaaggatggtttcctgcatctcagacatacagggagctcgtctcatgttca
aactgtacagactaccaatcaagaaaattagaaattcgatttgggcagaaaaagagcaat
gagcagacaaagcaatacgtccacttgttgaactccactcttacagctactgagagaacc
atatgctgcattcttgagaactatcaaaaggaagatggtgttgaggtaccagaagtcttg
cgaaacttcatgggtggagtgtccttcctacctttcaagaacaaaccagcccctgaagtc
aaagggcctagaaaacccgttcaactcaatcaagctggttcccaattcacatcaaccatg
aaactgtttcaaaagccgttcttcaacttggtccggggactcgggttacaaaaactaagc
ttgttattgaaatga
DBGET
integrated database retrieval system
