Rosa chinensis (China rose): 112194199
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Entry
112194199 CDS
T06020
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112194199
03015 mRNA surveillance pathway
112194199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112194199
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112194199
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112194199
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
IFT52_central
MCM5_C
Motif
Other DBs
NCBI-GeneID:
112194199
NCBI-ProteinID:
XP_024190211
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All DBs
Position
3:complement(17190989..17194713)
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AA seq
472 aa
AA seq
DB search
MYSTLAHAKQFLVPHVHRNDAVSSPLGFDLNFSGLNIHRENMFLDDPEDSTFTIVSDTRY
SSVRSFEDLNLSPEVIRALYVDMGYRRPSKIQAITLPMILTPPYKDLVAQAHNGTGKTTC
FGLGMLGRIDPGLKAPQALCICPTRELAIQILEVLQKMGMYTGIKMECAVPSVTPSSTSV
RDRAPVTAHIVIGTSGTVHKLMSYKKLGVSKLKVLVFDEADHMLAEDGFRDDSLRIKKEI
DKFSPHCQVLLFSATFNEMITKFIPRVMKDYNQLCLKKEELSLEAVKQYKVYCPDELSKI
DVIKNKIFDLGDYIGQRIIFVRSRTSAKMLHDELVGDGYSVTTIHGALSVEERDKIVKEF
KDGLTKVLISTDLLARGFDQQQVNCVVNYDLPIKRGASSSTRDPPEPDYELYLHRCGRAG
RFGSKGSVFNLLCLDTDKLVMAKIERYYNIQVPEVKISERAFQGALRAAGLL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtactccaccctggcccatgccaaacagtttcttgttccgcacgtccaccggaacgac
gccgtttcatcccctctgggattcgatctcaacttttccggcctgaacatccacagagag
aacatgttcctcgacgaccctgaagactccactttcacaatcgtgagtgacacgcggtac
agttcggtgagaagttttgaggatctgaatctgtcgccggaggtgattagggctttgtat
gtggacatgggctacaggaggcccagtaaaattcaggcaattactctgccgatgattctg
acgcctccttataaggatttggttgctcaagcacacaatggtactgggaaaactacttgc
tttgggctcgggatgctgggccgaatcgatcctggtctgaaagctcctcaggcgctctgc
atttgtcccaccagagagctggccattcagatattggaggtgcttcagaagatggggatg
tacacaggaataaaaatggagtgtgctgtcccaagtgtgacgccgagttctacatctgtt
cgtgaccgagcaccagtgacagcacatattgtgattggaacttctggtacagtgcataag
cttatgtcatacaagaagctgggtgtaagcaaattgaaggttcttgtttttgatgaggct
gatcacatgcttgccgaggatggctttagagatgattctttaaggataaagaaggagata
gataaatttagccctcactgccaggtgcttttgttttctgctacttttaatgaaatgatc
acaaagttcataccgagggtgatgaaagattataatcaactatgtttaaagaaagaagag
ctgtctttggaagctgtgaagcagtacaaggtctactgccctgatgagctgagcaaaatt
gatgtgatcaaaaacaaaatatttgatctaggagattacattggacagagaataatattt
gtaaggtcgagaactagtgcaaaaatgttgcatgatgaacttgttggagatggttattcg
gttactaccatacatggcgccctcagtgttgaagagagagacaaaatagtcaaagagttc
aaagatggtttaaccaaagttctcatatcaactgatctcctcgctcgaggctttgatcaa
cagcaggttaattgtgttgtcaattatgatcttccaatcaagcgtggagcttcttcaagc
acacgggatcctccagagcctgattatgagctttacttacatagatgtggccgggcaggt
cgttttgggagcaagggatctgtgttcaacttgctttgccttgatacggataagctggtc
atggcaaaaattgagcgctactataacatccaagtaccagaggttaagatcagtgaacgg
gcttttcaaggggctctaagagctgcggggttactgtaa
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