Rosa chinensis (China rose): 112194216
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Entry
112194216 CDS
T06020
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03030
DNA replication
rcn03410
Base excision repair
rcn03420
Nucleotide excision repair
rcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112194216
03410 Base excision repair
112194216
03420 Nucleotide excision repair
112194216
03430 Mismatch repair
112194216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcn03032
]
112194216
03036 Chromosome and associated proteins [BR:
rcn03036
]
112194216
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112194216
DNA replication proteins [BR:
rcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112194216
DNA Replication Termination Factors
ELG1-RFC complex
112194216
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
112194216
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112194216
Check point factors
HRAD17(Rad24)-RFC complex
112194216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
RuvB_N
Rad17
AAA_22
Motif
Other DBs
NCBI-GeneID:
112194216
NCBI-ProteinID:
XP_024190232
LinkDB
All DBs
Position
1:complement(32812739..32818338)
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AA seq
616 aa
AA seq
DB search
MPNPSIPRSSSNPLLSHTDMLPPAARTVCSAPISKALTSKLSWGQKIQRFIGRRSDSDLT
QESLEHHNRRQESFDRELQKRVQEISLHEAFNAELETRYSPYYIRGLTYPAALVPPSPGP
GESEPSSGATWTSISTFLFKMREWSSCRVSSKKGQLYSKKLKAQATYTAVKSRRPQPITP
NELSVNSETSNMVVTEDIISTVENKEKPLRERVLEAVATAATPTNTEREYIWADKYQPQC
LEDFICNRDKATQLQVLARGGGCGHFIFEGPPGVGKRTMIWAMLREAFGRDTIHAREESK
AFDLKGEVVGSINVQVKQSPQHVEVNLSELKGYEKHVIVELMKETQYNIPNKSALPCSLD
NCRALILYEADKLSTDALLYIKWLLERYKGCNKVFFCCSDVAKLQAIKTICTVVELLPPS
KNEIVEVLKFIAKQEGIDLPHQLAERFAENSKNSLRLAIRSFEATWKKGSYPFKEDQVIL
TGWEDEIADIGKNMIEEQSPKQLYIIRGKLQNLILHGVSPEFIFKSLVAELKKYLDENMQ
VQVESMYDEYSRNDETMFESDKALTLTRHQEMGKRLNDPSRKNIQRFLRIEEFIAKFMSC
YKGCTNTKTYHHDTPP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacccttcaatcccacgttcttcttccaatcccctactctcccacactgatatg
ctccctcctgcggctcgcactgtgtgttcagctcccatatcaaaagcactaacttcgaag
ctctcatgggggcagaagatacagagatttatcgggaggaggagtgactcggacttgaca
caagagagtctggagcaccacaaccggagacaggagagttttgatcgtgagcttcagaag
agggtacaggaaattagtcttcatgaggccttcaatgccgagcttgagaccagatatagt
ccatactacattcgaggactcacatatccggcagctcttgtacctcctagtcctggacca
ggcgaaagcgaaccatcttctggtgctacttggacctctatctcaactttcttgtttaaa
atgagggagtggagctcttgccgtgtcagctctaagaaaggtcagctttacagcaagaag
cttaaggctcaagcaacctacactgcagtgaaatctaggcgtcctcaaccaataacacct
aatgaactgtcagttaattcagaaacatcgaatatggttgttaccgaagacatcatcagc
actgttgaaaacaaagagaagccattgagggagagagtacttgaagcagtagctacagct
gctacaccaacaaataccgaaagggagtacatatgggcagacaagtaccagccccagtgc
ttagaagatttcatatgtaatagagacaaagcaactcagctacaggttttggccagaggt
ggagggtgtgggcatttcatattcgaaggacctccaggcgtggggaagagaactatgatc
tgggctatgctgagagaggcttttggacgtgacactatacatgctagagaggaatccaag
gcattcgacttgaagggtgaagtggtaggtagtattaatgtacaagtgaagcaatcccct
caacatgttgaagtaaatctctctgaattgaaaggttatgagaagcatgtgattgttgaa
ctcatgaaggaaacacagtacaacatacctaacaaatcagctttgccgtgcagccttgac
aactgccgagcactgatcttatatgaggcagacaagctatccacagatgccctactttat
attaagtggctattagaaaggtataaagggtgtaataaggtcttcttctgctgttctgat
gtggcaaagcttcaggccatcaagacaatttgtactgtcgttgagcttttgccgccttca
aagaatgagattgttgaagttttaaaatttatagccaaacaagaaggcatagatttgcca
catcaactggctgaaaggttcgctgaaaattccaaaaacagtctccgtctggcaattcgt
tcattcgaggccacttggaaaaagggttcttatccctttaaagaagatcaagtaattttg
acaggatgggaggatgaaattgcagatattggaaagaatatgatcgaagagcaaagccca
aaacagctatacattatccgtggaaagcttcaaaatctgatattgcatggtgtatctcct
gaattcattttcaaatccctagtagcagagctgaagaagtatttggacgagaacatgcag
gttcaagttgagagcatgtatgatgaatacagtaggaatgacgaaactatgtttgagagt
gacaaagcactgacacttactcgacatcaagaaatgggtaaaaggctcaatgatccatcc
aggaagaatatacaacggttcttgaggattgaagagtttatagccaaatttatgagctgc
tacaagggttgtacgaataccaagacttatcatcatgatactccaccatag
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