Rosa chinensis (China rose): 112194510
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Entry
112194510 CDS
T06020
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112194510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112194510
03036 Chromosome and associated proteins [BR:
rcn03036
]
112194510
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112194510
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112194510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
112194510
NCBI-ProteinID:
XP_024190509
LinkDB
All DBs
Position
1:28580449..28586912
Genome browser
AA seq
1094 aa
AA seq
DB search
MISHTSHSSISHHGCLTCAAQPPAHSTPPQLQHDVVHGGHHKRTVSELYSDTIVTSSAME
VDAGTPNSQIPAQHKKRRTGVSLCETFSNGNGASLPYLPTLEAADYYMQPSLTELAARER
VDPGYSTRVLDFTVGRFGYGSVKYPGETDVRCLELDRIVKFRRHEVIVYEDESAKPLVGQ
GLNKPAEVTLMLQTRVSCVDQRQKENIVKILRQSVEGQGAHFVSFNPENEEWKFFVNHFS
RFGLTEEDEEDMMMEDTAVAEDPPELNHDDISDADEENQMDPTGIVLSHSLPAHLGLDPI
KMQEMRMLMFSDLDEEAEDMKELPAHYNPSFGKEYSRSPLENAQRMSYRSTPPAVRKTPL
ALLEYKHGSFDSNSPGAILMAQENKALPLKTLKEGFKLDLSSETPVTRKDSRNIVDAGLL
MGRSFRVGWGPNGILVHAGTPIGSNGSQRVLSSVINMEKVAIDNVVRDKNNKVRAELVET
AITSPLELHKGLFHETKEVEVGSFSLRLQKLVSNRFMLSDICRSYVDIIERQLEVPGLSS
SACLVLPHQIMIWELIKVLFSERENGEKMESFGADDEVEMVQDEKLPSQETDPEALPLIR
RAEFSYWLQENVRHRVEEIISLNESNYLQSILLLLSGRQLDEAVELAASQGDVRLACLLS
QSGGSIVNRSDIAQQLELWRINGLDFSFIEKDRIRLYELLAGNVHGAFHDIEVDWKRFLG
LLMWYHLPPNIPLPIVFRTYHDLLNENKAPYPVPVYMDGRVEETVDRSAEKRYDISYYLM
MLHGSEDSEVDFLKTMFSAFSSTYDPLDYHMIWHQRAVLEAVGVISANDLHVLDMGFVSQ
LLCLGQCHWAIYVVLHMTHCEDFPYLHANLIREILFQYCDSWSSQISQRQFIEDLGIPKA
WLHEAMAVYFNYYGDLSKALEHFIECANWQKAHSIFVTSVAHTLFLSAKHSEIWRLATSM
EDHKSEIENWDLGAGIYISFYLTRSSLQGADDAMSELGSVESKNAASREFLGQLNLSLAV
WGAKLPMDVRVVYSKMADEICNLLLSDISEGPTRDVQLSCFDTVFSAPIPQDLRSNHLQD
VVSLFTCFLSEVAT
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcatacctcgcactcctctatcagccaccatggctgcctcacttgtgcggct
caacccccagcacactccactcctccacagcttcaacacgacgtcgtccatggcggccat
cataagaggactgtttctgaactctatagtgatactattgtgacttcctctgcaatggaa
gttgatgccggaactccgaattcacaaattccagctcaacacaaaaaaagaaggaccgga
gtttcattgtgcgagacttttagtaatggtaatggcgcttcgttaccctatttaccaact
cttgaagcagctgattactatatgcagccttctttgacggaactggctgctcgagaacgt
gtagatcctggttattctacccgagttttggactttacggttgggaggtttggttatgga
tctgtcaagtatcctggggagactgatgttaggtgtttagaattagatagaattgtcaag
ttccgcaggcatgaggtgattgtatatgaagatgagagtgccaagcctttggttggccag
ggccttaacaagcctgctgaagtaactttgatgctacaaacaagggtatcgtgtgttgac
cagagacagaaagagaatattgtgaaaatattgagacaaagtgtggagggacaaggagct
cattttgtttcgtttaatccagaaaatgaggaatggaaattctttgttaaccattttagc
agatttgggttgactgaagaagatgaagaagatatgatgatggaagatactgctgtagct
gaagaccctccggaattgaaccatgatgatatctctgatgctgatgaagaaaaccaaatg
gatcctactggaattgtgctctcgcattctcttcctgctcatcttgggcttgaccccatc
aagatgcaagaaatgagaatgttgatgttttctgatttggatgaggaagccgaggatatg
aaagaattacctgcacattataatccatcatttggtaaagaatactcaagatctccttta
gaaaatgctcaaaggatgagttatcgatctactccaccagctgtgcgaaagacccctcta
gcattgcttgagtacaagcatggtagttttgactcaaactctcctggagccattctaatg
gcccaggaaaataaagccttgccattgaagacactaaaagaaggttttaagcttgatctc
agtagtgaaacaccagtaactagaaaagattctcgcaacatagttgatgcaggtttgtta
atgggtaggtcttttcgagtaggatggggcccaaatggaattcttgtccatgctggcaca
ccaataggcagtaatggttcccaaagggtgctgtcatctgtaattaatatggagaaggtt
gctattgacaatgtagtcagagataaaaataacaaggttagagcagaacttgttgaaacg
gctatcacttctccattggagcttcacaagggactgtttcatgaaacaaaagaagttgaa
gttggatccttcagtctgagacttcagaagcttgtctcgaatcggtttatgctatcagat
atttgcaggagttatgtagatattattgagaggcagctggaggttcctggtttatcttcc
tctgcatgtttggttttgccacatcaaattatgatttgggaattgataaaagttcttttc
tctgaaagggaaaatggcgagaaaatggaatcttttggtgctgatgatgaggtagaaatg
gtgcaggatgagaagctcccttcacaggaaactgacccggaagcattacctctaattagg
agggccgagttcagttactggttgcaagaaaatgtgcgccatcgagtagaagaaatcatc
tccttgaatgagtccaattatctgcaatccatattattacttctgagtgggcggcagctg
gatgaagctgtggaactggctgcttctcagggagacgtgagattggcttgtttgttaagt
cagtctggtgggtccatagttaatcgttctgacattgcacagcagcttgagctttggagg
atcaatggactggatttcagtttcattgagaaagataggataaggctttatgagttgctt
gcgggtaatgtccacggtgcttttcatgatattgaagttgattggaagaggtttcttggg
ttattgatgtggtatcacttaccacctaatattccattacccattgttttccgcacatat
catgatcttcttaatgagaataaggctccatatcctgttcctgtttacatggatggacgt
gtagaagagactgtggatcggagtgcagagaaacgttatgacatatcatattaccttatg
atgctacatggaagtgaagatagtgaagttgatttcctgaagaccatgttcagtgctttc
tcgtcaacatatgatccacttgattaccatatgatctggcatcagcgtgctgtgttggaa
gcagttggggtcatcagtgccaatgatcttcatgttcttgacatgggatttgtttcccag
ttgttgtgtcttgggcaatgtcattgggccatctatgtggtccttcacatgacccattgt
gaagactttccatatcttcatgctaatcttattcgggaaattttgttccaatattgtgat
tcttggagctcacaaatatcacaacgccaattcattgaggacttgggtattcctaaagca
tggcttcatgaggctatggcagtttatttcaattattatggggatctttcaaaggcactt
gaacacttcattgaatgtgcaaactggcagaaagcgcattctattttcgtaacttctgtt
gctcacacattattcttgtcagccaaacactcagagatatggaggctagcaacttccatg
gaggaccacaaatcagaaattgaaaattgggacttgggagctggcatctacatttcattc
tatctaacaagaagttcattgcagggagctgacgatgccatgagtgaactgggttctgtt
gaaagcaaaaatgctgcttccagagagtttcttggtcagttaaacttgtctttggctgtt
tggggtgccaagctaccaatggatgtgagagtcgtctattcgaagatggcggatgaaata
tgcaacttgcttttgtctgatattagcgagggcccaacacgagatgttcagttaagttgc
tttgacaccgttttcagtgcgcccatacctcaggaccttcgctcaaatcatttgcaagat
gtagtgtctctcttcacatgctttctatccgaagttgctacatag
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