Rosa chinensis (China rose): 112194533
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Entry
112194533 CDS
T06020
Name
(RefSeq) THO complex subunit 4B-like
KO
K12881
THO complex subunit 4
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
rcn03015
mRNA surveillance pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112194533
09122 Translation
03013 Nucleocytoplasmic transport
112194533
03015 mRNA surveillance pathway
112194533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112194533
03041 Spliceosome [BR:
rcn03041
]
112194533
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112194533
TREX complex
112194533
Spliceosome [BR:
rcn03041
]
Complex C
Other components
EJC/TREX
112194533
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112194533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DEPP
Motif
Other DBs
NCBI-GeneID:
112194533
NCBI-ProteinID:
XP_040372979
LinkDB
All DBs
Position
3:37479244..37480832
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AA seq
227 aa
AA seq
DB search
MTFKTGKIRTHIFQRSTRVPNETNLSPAFKPRQYSPSPPERTVEILQNQKPCFTVLQNPF
PQDRLDLPLDALIAESKQQRRHNSHAHQPRGHNGHFGGGGSTSGPSRRPMNRNAYRTAPY
PTLPEMQGQPGPRRIELPLALSQAMNSEGSTKLYISNLDYDVTNRDIELLFSEVGELERH
SIHYDKSGRSKGTAEVVYKHYSDALAAIERYNNQHLDGKKVEIKLVG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaaaacaggcaaaataagaacccatatttttcaacgttcgacacgtgtccct
aatgagacaaatctttcccccgcctttaaaccacgccagtattctccttcaccaccagaa
cgtactgtagagattctgcaaaaccaaaaaccctgcttcactgtcctccaaaaccccttc
cctcaggaccgcctggacctccctctcgacgccctcatcgccgaatccaagcaacaacgc
cgtcacaacagccacgctcaccagccacgagggcataacggtcatttcggcggcggaggc
tccacctcaggcccctctcgtcggccgatgaaccgcaacgcctacagaacggcgccgtat
cccactctgccggaaatgcaaggacagcctggacccagaaggattgagctgccattggct
ttgagccaagcgatgaacagtgagggaagcaccaagctttatatatctaacttggactat
gatgttaccaatcgagatatagagttgctcttctctgaggttggtgaattggaaaggcac
tcaatccattatgataaaagtggaagatctaagggaacagctgaagttgtctataagcac
tattcagatgctctagcagcaatcgagagatacaacaatcagcatcttgatggaaagaaa
gtggaaattaagcttgtggga
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