KEGG   Rosa chinensis (China rose): 112194533
Entry
112194533         CDS       T06020                                 
Name
(RefSeq) THO complex subunit 4B-like
  KO
K12881  THO complex subunit 4
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03013  Nucleocytoplasmic transport
rcn03015  mRNA surveillance pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112194533
  09122 Translation
   03013 Nucleocytoplasmic transport
    112194533
   03015 mRNA surveillance pathway
    112194533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112194533
   03041 Spliceosome [BR:rcn03041]
    112194533
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     112194533
    TREX complex
     112194533
Spliceosome [BR:rcn03041]
 Complex C
  Other components
   EJC/TREX
    112194533
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112194533
SSDB
Motif
Pfam: RRM_1 DEPP
Other DBs
NCBI-GeneID: 112194533
NCBI-ProteinID: XP_040372979
LinkDB
Position
3:37479244..37480832
AA seq 227 aa
MTFKTGKIRTHIFQRSTRVPNETNLSPAFKPRQYSPSPPERTVEILQNQKPCFTVLQNPF
PQDRLDLPLDALIAESKQQRRHNSHAHQPRGHNGHFGGGGSTSGPSRRPMNRNAYRTAPY
PTLPEMQGQPGPRRIELPLALSQAMNSEGSTKLYISNLDYDVTNRDIELLFSEVGELERH
SIHYDKSGRSKGTAEVVYKHYSDALAAIERYNNQHLDGKKVEIKLVG
NT seq 681 nt   +upstreamnt  +downstreamnt
atgacttttaaaacaggcaaaataagaacccatatttttcaacgttcgacacgtgtccct
aatgagacaaatctttcccccgcctttaaaccacgccagtattctccttcaccaccagaa
cgtactgtagagattctgcaaaaccaaaaaccctgcttcactgtcctccaaaaccccttc
cctcaggaccgcctggacctccctctcgacgccctcatcgccgaatccaagcaacaacgc
cgtcacaacagccacgctcaccagccacgagggcataacggtcatttcggcggcggaggc
tccacctcaggcccctctcgtcggccgatgaaccgcaacgcctacagaacggcgccgtat
cccactctgccggaaatgcaaggacagcctggacccagaaggattgagctgccattggct
ttgagccaagcgatgaacagtgagggaagcaccaagctttatatatctaacttggactat
gatgttaccaatcgagatatagagttgctcttctctgaggttggtgaattggaaaggcac
tcaatccattatgataaaagtggaagatctaagggaacagctgaagttgtctataagcac
tattcagatgctctagcagcaatcgagagatacaacaatcagcatcttgatggaaagaaa
gtggaaattaagcttgtggga

DBGET integrated database retrieval system