Rosa chinensis (China rose): 112194792
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Entry
112194792 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112194792
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112194792
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112194792
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Chordopox_A33R
Motif
Other DBs
NCBI-GeneID:
112194792
NCBI-ProteinID:
XP_024190789
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Position
3:complement(33163301..33167063)
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AA seq
612 aa
AA seq
DB search
MSNTQVPNDGPMMSNTRGSKHNADNVESQPRDPLWRDPDAVSTKQKLGETLLSVSFWHKM
FVIACVIAVSLDPLFFYIPVINEERKCLALDIELMIIALILRSLTDVTFVVSIIYHVCKA
INDAHKEHRQKKSDEVAPDWEFSKVSAAEIIPFAKLVAGKLAWRSTLTSILAVFPMPQLL
LIFVFFEMRGHGHLRHRKILNFFVLAQYLPRIYRIYLSSQKLRQTTGIWIKALFNFFLYI
LASHVLGAFWYFFSIQRETSCWRRACVKNSTVEGCKTTLYCEGHNITARNPALLNQFCSI
SAEENATAAFDFGIFLHSLKNNITRDIPFGTKLSYSFWWGLRNLSNFGTNLETSNYVWET
CFAVSISVIGLLLFIYLIGNVQTFVSMEAERWEDIRNKIRLKEKDIRGWMDRHKVPENLK
KEIKKRIEKKLEENKDTDHETLFFNIPMRCLRHFLGKKLLEKVPKLAMMDKRVLRMMCDN
LKPVMHDEGTEVFQMGAPLDRMLLITEGTLLTYKSNSNDCHVATENTVRDFYVPEELIEW
VTEKKELRQLPCSFFNVKCSSKVEGFELMAKDLRSVVFKNENRWKYSISQSDNSMAQKHG
VNPSTSRDLERA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacacgcaggtacccaatgacggccctatgatgagcaacacacggggaagcaag
cacaatgccgacaatgttgagtcacaaccgcgagatcccctgtggagagatccagatgca
gtttcaacaaaacaaaaattgggagaaacacttctttcagtctcattctggcataagatg
ttcgtaattgcatgtgtgatcgcggtctcattagacccgttgttcttctacattccagtc
atcaatgaagaacgaaagtgtcttgcattagacatagagttgatgattatagctctcatt
ttgcgatcgctcactgatgtcactttcgtagtgagtatcatatatcatgtttgcaaagcc
atcaacgatgcgcacaaagaacacagacaaaaaaagtctgatgaagtggcaccggattgg
gaattttcgaaggtatcagcagcggagataattccatttgctaaattagttgctgggaag
ctagcttggcgctctacgctaaccagcattttagctgtttttcccatgccacaactgctt
ctaatatttgtcttcttcgaaatgagaggccatggacacttgcggcatagaaagattctg
aatttctttgttctagctcaatatctgccgaggatttatcgaatttacctatcatctcag
aaactcagacaaactactggaatatggattaaagctctgtttaacttttttctatatatc
cttgcaagtcatgtccttggagctttttggtactttttctctattcaacgagaaacttct
tgttggcgtcgagcatgtgtaaagaatagtacagttgaaggatgtaagactaccttatat
tgcgagggtcacaatattactgcaagaaatcccgcactccttaatcaattttgctctata
agtgctgaagagaatgctacggccgcttttgattttggaatatttctgcattccctcaaa
aataatatcacacgggatatacctttcggaacgaagttatcttactctttttggtgggga
ttacgtaatctaagtaattttggcacaaatctcgaaacaagcaactatgtgtgggaaact
tgctttgcagtttctatttctgtcattggcttgctactatttatatatctcattggaaat
gtacagacattcgtgtccatggaagctgaaagatgggaggatataagaaacaagatacga
ttgaaagagaaagatataagaggatggatggacagacataaggtcccagagaatttgaag
aaagaaattaagaagaggattgagaaaaaactggaagagaacaaagatactgatcatgag
actcttttctttaatattccgatgaggtgtcttaggcatttcctcggcaagaaactgcta
gagaaagtaccgaagcttgcaatgatggataaaagagtgttgagaatgatgtgtgacaat
ctaaagccagtgatgcatgacgagggcaccgaggtttttcaaatgggagctccactagat
agaatgctactcatcacagaaggcacattattgacctacaaaagtaacagtaatgattgt
catgttgcaactgaaaacacagtgcgcgacttttacgtccccgaagaactgatcgagtgg
gtaacagaaaagaaggagctacgccagcttccctgctctttcttcaatgtgaaatgcagt
tcgaaagtagaaggctttgaactcatggccaaggacttgagaagtgtagttttcaaaaac
gaaaacaggtggaaatatagcattagccagtcagacaacagcatggcgcagaaacatgga
gtgaatcccagtactagcagagacctggagcgcgcttaa
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