Rosa chinensis (China rose): 112194919
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Entry
112194919 CDS
T06020
Name
(RefSeq) long chain acyl-CoA synthetase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00061
Fatty acid biosynthesis
rcn00071
Fatty acid degradation
rcn01100
Metabolic pathways
rcn01212
Fatty acid metabolism
rcn04146
Peroxisome
Module
rcn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112194919
00071 Fatty acid degradation
112194919
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112194919
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcn01004
]
112194919
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112194919
Enzymes [BR:
rcn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112194919
Lipid biosynthesis proteins [BR:
rcn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112194919
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of breast milk
112194919
Exosomal proteins of breast cancer cells
112194919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112194919
NCBI-ProteinID:
XP_024190939
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Position
3:34163515..34168922
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AA seq
661 aa
AA seq
DB search
MKMFSAQVEEGRKGQNGKPSVGPVYRNLLSKNDFPPPHPEIRTAWDVFSQSAQKFPGNRM
LGWRKIVDGKIGPYVWKTYKEVYEEVLLVGSALRASGVEPGSRIGIYGSNCPQWIMAMEA
CNAHSLTCVPLYDTLGPGAVNFIIDHAEVDFVFVQDKKVKELLSPDCTSTQRLKVMVCFT
SLTDEEKDKAVQIGMKPYSWSEFTEMGKQNPSDIFPPQPETICTIMYTSGTSGDPKGVVL
THENTAYGVRGIDLFMEQFEDKMTVDDVYLSFLPLAHILDRIIEEYFFRTGASVGYYHGD
LNALSDDMMELKPTLLAGVPRVFEKIHEGIKQAVQQLNPRRQKIFDILYKYKLAWMNMGF
KNKNASPIADLLAFRKIKNRLGGEIRLILSGGAPLSAEIEEFLRVTCCCFVVQGYGLTET
VGPTTFGYPDEMCMIGAVGTVSVFNELRLEEVPDMGYDPLGDPPCGEICLRGKTVFAGYH
KSPELTREAIKDGWFHTGDIGQILPNGTIKIIDRKKNLIKLSQGEYVALEYLENIYGISS
VIDDIWVYGNSFKSKLVAVVVPEEKSTKKWADLNGHTGSFSDLCSLDELKNHILEEFKLT
AKRNKLRGFEYIKGIIIEPHPFDMERDMVTATLKKKRNQLLKYYQVRLDELYQNLDAGQK
Y
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttctcagctcaagttgaggaaggaagaaaaggacagaacgggaagccttca
gttggtccagtgtatcggaatttactttcaaaaaatgattttccaccgcctcatcctgaa
ataagaacagcttgggatgtctttagtcaatctgctcaaaagtttcctggaaatagaatg
cttggatggcgtaaaattgtggatgggaagataggaccttatgtttggaaaacctacaag
gaggtttatgaagaagttctgcttgttggttctgcattacgagcatctggtgtggaacct
ggttcccggattggaatttatggttcaaattgccctcaatggattatggcaatggaagct
tgcaatgcccatagtttgacctgtgtgcctctctacgataccctagggccaggagctgta
aacttcatcatagatcatgcagaggttgattttgttttcgtccaagataagaaagtgaaa
gaactattgagtcctgattgtacatctacccaacgactaaaagttatggtttgcttcact
tcattgacagatgaagagaaggataaagcagtgcagattgggatgaaaccgtactcatgg
agtgagttcactgagatgggaaaacaaaacccgtcagatatttttccacctcagcctgaa
actatctgcacaattatgtacacaagtggtactagtggagatcctaaaggtgttgtgcta
acacatgaaaacaccgcatatggtgtgagagggattgacctctttatggagcaatttgaa
gataagatgacagtggatgatgtgtatctatctttccttccccttgctcatattctggat
cgcataattgaggagtatttttttcgcactggtgcttctgttggctactatcatggagat
cttaatgcattgagtgatgatatgatggagttgaagccaacacttcttgctggagtacct
cgtgttttcgaaaaaatacatgaaggtataaagcaagcagtgcaacagctcaatcccagg
aggcagaagatttttgacattctctacaagtacaaacttgcttggatgaacatggggttt
aagaataaaaatgcctcaccaatagctgatctgttggccttcagaaagataaagaatagg
cttgggggtgaaattcgacttatattatctggaggtgcacccttaagcgctgagattgaa
gaattcttgcgagttacttgctgctgtttcgtagtccaaggatatggtttgacagaaact
gttgggccaactacttttgggtatcctgatgaaatgtgcatgattggtgctgttggtact
gtatctgttttcaatgagctgcgcctcgaagaggttcctgatatgggctacgatccactt
ggagatcctccttgtggtgagatatgtttgagaggcaagactgtttttgctggttaccac
aaaagtcctgaattgacaagggaagcaatcaaagatggctggttccacacaggggacata
gggcaaatacttccaaatggaaccatcaagatcattgataggaaaaagaatctgattaaa
ctctcacaaggagagtatgttgcacttgagtacttggaaaatatttatggcatttcttct
gttattgatgatatctgggtctacggaaatagcttcaagtcaaagcttgttgcagtggtg
gtaccagaagaaaaaagcaccaaaaagtgggctgatttaaatggtcacacgggttcgttt
tctgacctttgttctcttgatgagctcaagaaccatattctggaagagttcaagctaaca
gctaagagaaacaagctgagaggttttgaatatatcaaaggaatcattatagaacctcac
ccctttgacatggaaagggacatggtgactgccactttgaagaagaaaagaaatcagttg
ctcaagtattaccaggttcgacttgatgaactctaccaaaatctggatgccggacagaaa
tactag
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