Rosa chinensis (China rose): 112194966
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Entry
112194966 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112194966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112194966
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112194966
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GFIT
Motif
Pfam:
cNMP_binding
DUF2254
Motif
Other DBs
NCBI-GeneID:
112194966
NCBI-ProteinID:
XP_024191004
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Position
3:12889921..12901882
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AA seq
632 aa
AA seq
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MASSAKFQNNCPLQLNDSVQVEMGEVSIDHASMPGNSISKIEERKLAIIKEQDSEDMSNI
DMPILYIFKKIIHTVFLIPAVLLVAIISPDESQFFIFSSFISMLLDPLFLYIPLIKEETK
CLMLDKKLMIAALILRIVTDLRYVMKIGSKIKKWRGSPKEIAGSIATDVVAILPIPQVVV
LVFLPRMRSSGSLSIMKFLNSLILFQYLQRVYPIYRYCKNLNKKIHLSSAPTRAWIPSLF
NILIYILASYVLGTFWYFFSIQREIDCWEYACQSEKGCEFSTHCDANTFRNVTLLKLACP
INPPNAATFDFGIFLYALQSGVQESTNVPQKLLLCFSWGLRNLSSFASNLNTSTYGWETL
FVVAISISGLVLFIYFLGHVQTFMQVAGKSERSRQKWKKILEPKIESMLSEYDLPAKVKK
SIDYVVKKKDLEDPDLLLENMSSIFTFKREVDDQTLLAELTSIRHSLFLEKLKRVVLHRP
GTCMNDMVLKEICKHLDPVIYPKGSYIIHEGEPLDMMFFITQGIALEYTTDRSITTSRLE
KGDCYGEELILSWAATATTSFSDLPNSGSTVKAHKNVEIFAIQAADLQRVLSQPSSQYSS
NEVTHAAETKVIQSVLSQLRDLLIKPRWLTLG
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatctgcaaagttccaaaataattgcccgcttcagcttaatgattcggtacaa
gtggagatgggtgaagtgtctattgaccatgcaagcatgccaggaaattcgatttcaaag
attgaagagcggaagttggccattattaaagagcaggattcggaggatatgtcaaatatc
gacatgcctattttgtacatatttaagaagattatacatacagtgtttcttatcccagcg
gtgttactcgtagcaataatatcaccggatgagtctcaatttttcatattctctagtttc
atctctatgttactggatcctttgtttctgtacattcctctcatcaaagaggagactaag
tgcctcatgttggacaagaagttgatgatagcagctcttattctgcgaatcgtcacagat
cttcgctatgtaatgaaaataggctctaagattaaaaagtggcggggatctcctaaggaa
atagctgggagcatcgcaactgacgttgtcgctattcttcctattccacaagttgtcgtc
ttagttttccttccgagaatgaggagctctggatctttgagtataatgaagtttctcaac
tcgcttattctattccaatatctacaacgagtttatcctatctatagatactgcaagaat
cttaacaagaagatacatttgtcgagtgctcctacacgggcttggataccaagtttattc
aatattctcatttacatccttgccagttatgtactagggacgttttggtattttttctct
atccaacgagagatagactgttgggaatatgcttgccaaagtgaaaaaggatgcgagttt
agcactcattgtgatgccaatacattcagaaatgttacattgctaaaacttgcttgccct
ataaatccaccgaatgcggcaacatttgatttcggtatatttctttatgctcttcagtcc
ggtgtgcaagagtcaacaaacgtaccacaaaagttattgttatgtttctcgtggggccta
cgaaatttgagttcttttgcttccaacctcaataccagtacctatggatgggaaacctta
tttgtggttgctatttctataagtggcttggtactatttatatatttccttggacatgtg
cagacatttatgcaggttgctggcaaatcagaaaggtcccgtcaaaagtggaaaaagatt
ttggaaccaaaaatagaatccatgttatctgaatatgacctccctgctaaagtgaaaaaa
agcatagactatgtagtaaaaaagaaagatttagaagacccagatcttcttctggagaat
atgtcttcaatttttaccttcaagcgtgaagtagatgaccagactttactagctgaatta
acttccatcagacatagtctcttcttggagaagttaaagagagtagtactccatcgccca
ggtacttgcatgaacgatatggtgttgaaggagatatgtaagcaccttgatccagtgatc
tatcctaagggaagctatattatccacgagggggagcctcttgatatgatgttcttcatc
acccagggcattgcactcgagtacaccactgaccgctcaataaccacttcgcgtcttgag
aaaggagactgctacggtgaagagcttatcctaagctgggcagcaactgcaacaacctcg
ttttccgacttgcctaactcaggcagtactgtcaaggcccataaaaatgtcgaaatcttt
gctatccaggctgccgatttacagagagttttgtctcagccgtcgagccaatattccagc
aatgaggtcacccatgcagcagagaccaaggttatacagagcgttctgtctcaattgcgt
gatttattaatcaaaccacgttggctcactctgggctaa
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