KEGG   Rosa chinensis (China rose): 112194981
Entry
112194981         CDS       T06020                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcn04131]
    112194981
Membrane trafficking [BR:rcn04131]
 Autophagy
  Other autophagy associated proteins
   Others
    112194981
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WDR55 BCAS3_WD40 Beta-prop_IFT140_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_IFT122_2nd Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 112194981
NCBI-ProteinID: XP_024191022
LinkDB
Position
3:5169170..5171449
AA seq 396 aa
MTTTAFSFSSPPFQFPVPDLMASDCAPDDSYCPSPAQNPTPTPTLPPAQLLNLSFNQDHG
CFAAGTDLGFRIYNCDPFREIFRRDFGPRGAVGLVQMLFRCNILTIVGGGPDPLYSPNKV
MIWDDHQSRCIGELSFRSEVKAVKLRRDRIVVVLVQKIFVYNFADLKLLHQIETIANPKG
LCEVSHVGPQAVLVCPGLQKGQIRVEHYGSKRTKFIMAHDSRLACFALTQDGRLLATASS
KGTLIRVFNTLDGSLLQEVRRGADRAEIHSLAFSASAQWLAVSSDKGTIHVFNLKVDSGS
LGNISPSESSPPHPSGVSSLSFMKGVLPRYFSSEWSVAKFHLHEGLEYIVAFGHQKNTVV
VLGMDGSFYRCEFDPVNGGEMTQLEYYNFLKPEETF
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgaccaccaccgccttttccttttcctcacctccctttcaattccccgtccccgattta
atggcctccgactgcgcccccgacgactcctactgcccctccccggcccaaaacccgact
ccgactccgactcttcccccggcccagctcctcaacctctccttcaaccaggaccacggc
tgcttcgccgccggcaccgacctcggcttccgcatctacaactgcgaccccttccgcgag
atcttccgccgcgacttcggcccacgcggcgccgtcgggctggtccagatgctcttccgc
tgcaacatcctcaccatcgtcggcggcggccccgaccccctctactcgcccaacaaggtc
atgatctgggacgaccaccagtcccgctgcatcggcgagctctccttccgctccgaggtc
aaagccgtcaagctccgccgcgaccgcatcgtcgtcgttctggtccagaagatcttcgtc
tacaatttcgccgatttgaagcttctccaccagattgagaccatcgccaaccccaaggga
ctctgcgaggtctcgcacgtcggccctcaggcggtgctcgtctgcccggggctccagaaa
ggtcaaattcgggtcgagcattacgggtcgaagcggaccaagtttattatggcccacgat
tccaggctggcctgcttcgctctcacgcaggacggcaggttgctggctacggccagcagt
aaagggactttgatcagagttttcaatactctggatggttcattgctgcaagaggtaagg
agaggagcagatagagcagagatacatagtcttgctttctctgctagtgcccaatggcta
gctgtctcgagtgacaagggaactatccatgttttcaatctgaaggttgattcaggatcc
ttggggaatatcagtccatcagaatccagtcctcctcatccatcaggcgtttcatctctc
tctttcatgaaaggtgttctgccaaggtatttcagctcagaatggtcagtggctaaattt
cacttgcacgaaggtttggagtacattgttgccttcggccaccagaagaacactgtcgtg
gttctaggcatggatggaagcttctatcgatgtgaatttgaccctgtcaatggaggagaa
atgactcagcttgaatattataatttcttgaagccagaagaaaccttctga

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