Rosa chinensis (China rose): 112194981
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Entry
112194981 CDS
T06020
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112194981
Membrane trafficking [BR:
rcn04131
]
Autophagy
Other autophagy associated proteins
Others
112194981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
BCAS3_WD40
Beta-prop_IFT140_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT122_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
112194981
NCBI-ProteinID:
XP_024191022
LinkDB
All DBs
Position
3:5169170..5171449
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AA seq
396 aa
AA seq
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MTTTAFSFSSPPFQFPVPDLMASDCAPDDSYCPSPAQNPTPTPTLPPAQLLNLSFNQDHG
CFAAGTDLGFRIYNCDPFREIFRRDFGPRGAVGLVQMLFRCNILTIVGGGPDPLYSPNKV
MIWDDHQSRCIGELSFRSEVKAVKLRRDRIVVVLVQKIFVYNFADLKLLHQIETIANPKG
LCEVSHVGPQAVLVCPGLQKGQIRVEHYGSKRTKFIMAHDSRLACFALTQDGRLLATASS
KGTLIRVFNTLDGSLLQEVRRGADRAEIHSLAFSASAQWLAVSSDKGTIHVFNLKVDSGS
LGNISPSESSPPHPSGVSSLSFMKGVLPRYFSSEWSVAKFHLHEGLEYIVAFGHQKNTVV
VLGMDGSFYRCEFDPVNGGEMTQLEYYNFLKPEETF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccgccttttccttttcctcacctccctttcaattccccgtccccgattta
atggcctccgactgcgcccccgacgactcctactgcccctccccggcccaaaacccgact
ccgactccgactcttcccccggcccagctcctcaacctctccttcaaccaggaccacggc
tgcttcgccgccggcaccgacctcggcttccgcatctacaactgcgaccccttccgcgag
atcttccgccgcgacttcggcccacgcggcgccgtcgggctggtccagatgctcttccgc
tgcaacatcctcaccatcgtcggcggcggccccgaccccctctactcgcccaacaaggtc
atgatctgggacgaccaccagtcccgctgcatcggcgagctctccttccgctccgaggtc
aaagccgtcaagctccgccgcgaccgcatcgtcgtcgttctggtccagaagatcttcgtc
tacaatttcgccgatttgaagcttctccaccagattgagaccatcgccaaccccaaggga
ctctgcgaggtctcgcacgtcggccctcaggcggtgctcgtctgcccggggctccagaaa
ggtcaaattcgggtcgagcattacgggtcgaagcggaccaagtttattatggcccacgat
tccaggctggcctgcttcgctctcacgcaggacggcaggttgctggctacggccagcagt
aaagggactttgatcagagttttcaatactctggatggttcattgctgcaagaggtaagg
agaggagcagatagagcagagatacatagtcttgctttctctgctagtgcccaatggcta
gctgtctcgagtgacaagggaactatccatgttttcaatctgaaggttgattcaggatcc
ttggggaatatcagtccatcagaatccagtcctcctcatccatcaggcgtttcatctctc
tctttcatgaaaggtgttctgccaaggtatttcagctcagaatggtcagtggctaaattt
cacttgcacgaaggtttggagtacattgttgccttcggccaccagaagaacactgtcgtg
gttctaggcatggatggaagcttctatcgatgtgaatttgaccctgtcaatggaggagaa
atgactcagcttgaatattataatttcttgaagccagaagaaaccttctga
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integrated database retrieval system