Entry |
|
Name |
(RefSeq) probable pectate lyase 15
|
KO |
|
Organism |
rcn Rosa chinensis (China rose)
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Pathway |
rcn00040 | Pentose and glucuronate interconversions |
|
Brite |
KEGG Orthology (KO) [BR:rcn00001]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112195032
Enzymes [BR:rcn01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112195032
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
3:1748626..1750194
|
AA seq |
419 aa
MIYMCILVLFLFGFIAETRIAPTTVDDDPEEVASMVSLSIQNSIERKLRQLQGSSLSCAT
GNSIDDCWRCDSNWYNNRKRLADCAIGFGRNTIGGRDGRFYIVTDSSDDDAVNLKVGTLR
HAVIQSEPLWIVFQRDMVIQLKQELIMNSYKTIDGRGANVHIANEACITIQNVTNIIIHG
LHIHDCKPTGNAMVRSSPSHFGWRGMADGDAVSIFGSSNVWIDHNSLSNCADGLVDVVMA
STAVTISNNYFSHHNDVMLFGHSDSYTGDKDMQVTVAYNHFGEGLMQRLPHCRHGYCHVV
NNDYSHGWGIYAIGGGANPTINSEGNRFVADLKRYPDSSEVTKRTSGDKLEWKNWNWISQ
GDLFLNGAYFVPSGATGANSEAYAKASSYAKAKKSSLVVAITSSAGALTCRKDHMCTSN |
NT seq |
1260 nt +upstreamnt +downstreamnt
atgatttatatgtgtatattggttctcttcctgttcggcttcattgccgaaacacgaatt
gccccaacaacagtcgatgacgaccccgaggaagttgcttccatggtctccttgagcatc
caaaacagcatcgaaagaaagctcaggcaactccagggatcatcattatcatgtgctacc
gggaattccatcgacgactgttggcgatgtgactccaattggtacaacaatcggaagcgc
ctcgcggattgcgctattggtttcggcaggaacacaattggaggccgcgacggccgcttc
tacatcgtcactgactctagtgacgacgatgccgtcaaccttaaagtcgggacccttcgc
cacgctgtaatacaatccgagcctctatggattgtgttccagcgtgacatggtgatccag
ctcaagcaggagcttatcatgaatagctataaaaccatcgacggccgcggagccaatgtt
cacattgcaaatgaagcatgcattacaatccaaaacgtcacgaacatcataatacatggc
ctccacatccatgattgcaagcctacggggaatgccatggtgaggagctcaccgtcacac
tttggttggagaggaatggcagacggtgatgctgtgtcgattttcggctccagcaacgtg
tggattgatcacaactcactctccaactgcgccgacggcctcgtggatgttgtcatggcc
tcaactgcagttacaatctctaacaattacttctcgcaccataatgatgtcatgttgttt
ggtcacagcgactcttatactggagacaaggacatgcaagtgacggttgcttacaaccac
tttggggaaggactgatgcaaaggttgccgcattgtaggcacggttattgtcatgtggtg
aacaatgactacagccacggttgggggatatacgccatcggtggaggtgcaaaccctacc
atcaacagtgaaggcaaccgatttgttgctgatctgaaaaggtacccggattcgagtgag
gttaccaagaggacttcgggggacaagttggagtggaagaactggaattggatttctcaa
ggagatttgttcttgaatggtgcctactttgttccgtctggagcaaccggagctaactcg
gaggcctatgctaaggcctcgagctatgcaaaagctaagaaatcttccctggttgtagcc
ataacttcttctgctggtgcactcacctgccgcaaagaccatatgtgcactagtaactag |