Rosa chinensis (China rose): 112195032
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Entry
112195032 CDS
T06020
Name
(RefSeq) probable pectate lyase 15
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112195032
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112195032
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112195032
NCBI-ProteinID:
XP_024191111
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Position
3:1748626..1750194
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AA seq
419 aa
AA seq
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MIYMCILVLFLFGFIAETRIAPTTVDDDPEEVASMVSLSIQNSIERKLRQLQGSSLSCAT
GNSIDDCWRCDSNWYNNRKRLADCAIGFGRNTIGGRDGRFYIVTDSSDDDAVNLKVGTLR
HAVIQSEPLWIVFQRDMVIQLKQELIMNSYKTIDGRGANVHIANEACITIQNVTNIIIHG
LHIHDCKPTGNAMVRSSPSHFGWRGMADGDAVSIFGSSNVWIDHNSLSNCADGLVDVVMA
STAVTISNNYFSHHNDVMLFGHSDSYTGDKDMQVTVAYNHFGEGLMQRLPHCRHGYCHVV
NNDYSHGWGIYAIGGGANPTINSEGNRFVADLKRYPDSSEVTKRTSGDKLEWKNWNWISQ
GDLFLNGAYFVPSGATGANSEAYAKASSYAKAKKSSLVVAITSSAGALTCRKDHMCTSN
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatttatatgtgtatattggttctcttcctgttcggcttcattgccgaaacacgaatt
gccccaacaacagtcgatgacgaccccgaggaagttgcttccatggtctccttgagcatc
caaaacagcatcgaaagaaagctcaggcaactccagggatcatcattatcatgtgctacc
gggaattccatcgacgactgttggcgatgtgactccaattggtacaacaatcggaagcgc
ctcgcggattgcgctattggtttcggcaggaacacaattggaggccgcgacggccgcttc
tacatcgtcactgactctagtgacgacgatgccgtcaaccttaaagtcgggacccttcgc
cacgctgtaatacaatccgagcctctatggattgtgttccagcgtgacatggtgatccag
ctcaagcaggagcttatcatgaatagctataaaaccatcgacggccgcggagccaatgtt
cacattgcaaatgaagcatgcattacaatccaaaacgtcacgaacatcataatacatggc
ctccacatccatgattgcaagcctacggggaatgccatggtgaggagctcaccgtcacac
tttggttggagaggaatggcagacggtgatgctgtgtcgattttcggctccagcaacgtg
tggattgatcacaactcactctccaactgcgccgacggcctcgtggatgttgtcatggcc
tcaactgcagttacaatctctaacaattacttctcgcaccataatgatgtcatgttgttt
ggtcacagcgactcttatactggagacaaggacatgcaagtgacggttgcttacaaccac
tttggggaaggactgatgcaaaggttgccgcattgtaggcacggttattgtcatgtggtg
aacaatgactacagccacggttgggggatatacgccatcggtggaggtgcaaaccctacc
atcaacagtgaaggcaaccgatttgttgctgatctgaaaaggtacccggattcgagtgag
gttaccaagaggacttcgggggacaagttggagtggaagaactggaattggatttctcaa
ggagatttgttcttgaatggtgcctactttgttccgtctggagcaaccggagctaactcg
gaggcctatgctaaggcctcgagctatgcaaaagctaagaaatcttccctggttgtagcc
ataacttcttctgctggtgcactcacctgccgcaaagaccatatgtgcactagtaactag
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