Rosa chinensis (China rose): 112195102
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Entry
112195102 CDS
T06020
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112195102
Spliceosome [BR:
rcn03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112195102
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
112195102
NCBI-ProteinID:
XP_024191226
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All DBs
Position
3:25907692..25913278
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AA seq
641 aa
AA seq
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MAIDSLVLGAGQEVGKSCVIVTINGKRIMFDCGMHMGHLDHRRYPDFSLIGPNFNQTLTC
IIITHFHLDHIGALPYFTEVCGYSGPIYMTYPTKALAPLMLEDYRKVMVERRGEEEQFTS
EHIVECMKKVIPVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTP
DRHLGAAQIDRLSLDLVITESTYATTIRDSKYAREREFLRAVHTCVAGGGKVLIPSFALG
RAQELCILLEDYWERMNLKVPIYFSAGLTRQANMYYKMLISWTSQKIKETYSTHNAFDFK
NVHKFERSMIDAPGPCVLFATPGMISGGFSLEVFKHWAPSEKNLVTMPGYCVAGTIGHKL
MSGKPTKIDLDKDTRIDVRCQIHQLTFSPHTDAKGIMDLVKFLSPKHVILVHGEKPRMAT
LKGRIQSELGIQCYDPANNETVSVPSTHYATAVASDAFVQSCSNPNFKFSTSGSEHEQGS
SSSNRKSIPRLQVSDDRVAEGILVMEKNKKAKVVHQDELLVMLEEKKHQVKFAYCCPAHI
GNLQENQETESTGLPLSSTNNDMLQLLSAKLTNELSEVNIQDFGDHLQVESFRVSICSKE
DCPYRLSDNGGEEHYEPMFFCCSWAMEDEKLAWKVISMCQK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgactctctcgttctgggcgctgggcaagaggtaggcaagagctgtgtgatt
gtgacgataaacgggaaacgcatcatgttcgactgtggaatgcatatgggccacctcgac
caccgccgctacccggacttctctctcatcggcccaaacttcaatcaaaccctcacttgc
atcatcattactcactttcatctggatcacattggcgcgctcccttacttcactgaagtc
tgcggttacagtggccccatttacatgacttatccgacgaaggcgctggcgcctttgatg
ttggaggattataggaaagtgatggttgagagaaggggagaggaggaacagtttacgtcg
gagcacattgtcgaatgcatgaagaaagttataccggtggacctgaagcagacggtgcag
gttgataaggatcttcaaatccgtgcttactatgcaggacatgttcttggagctgcaatg
ttttatgcaaaggtgggagacgctgctatggtgtacacaggagactataatatgacacca
gataggcatcttggagcagctcaaattgatcgactaagtttggaccttgttattacagag
tccacatatgcaacaaccattcgtgattcaaaatatgcccgggaaagagaatttctcaga
gctgttcacacttgtgttgctggtgggggaaaagtgctaattccttcgtttgctctggga
agagctcaggaactctgtatcttattggaagactactgggagcgcatgaatttaaaagtt
cctatttacttctcagcaggtttgacgcgtcaagccaatatgtattataagatgctcatc
agttggaccagccagaaaatcaaagagacatactccacacataatgcatttgattttaaa
aatgttcacaaatttgaacggtctatgatagatgctcctggaccttgtgttctgtttgcc
acaccagggatgatcagtggtggtttttcacttgaggtttttaagcactgggctccttca
gaaaagaatcttgttacaatgccagggtattgtgtggctggaaccataggacataaatta
atgtcgggtaaaccgaccaaaattgatctggacaaggacaccagaattgatgtgcgatgc
cagattcatcaattgactttcagtcctcatacagatgccaaagggattatggatctggtg
aagtttctttctcccaagcacgtgattcttgttcatggtgagaagcctaggatggctact
ctaaaaggaagaattcaatccgaactgggaattcaatgctacgaccctgcaaacaatgag
accgtgtcagttccgtccacccactatgcgacagcagtagcttctgatgcatttgtccaa
agttgctcaaatccaaacttcaagttttctacaagcggctcagaacacgagcaaggttca
agttcgagtaacagaaaatccattccacgactgcaagtaagtgatgatagggtagccgaa
gggatcttggttatggagaaaaacaaaaaagccaaggtagtgcaccaagatgagctcctg
gtcatgttagaagaaaagaagcaccaagtgaagtttgcatattgctgtcctgctcacatt
ggtaacttgcaagagaatcaagagactgagagcaccggtctgcctctgtcttcaacaaac
aatgatatgcttcagctattgtctgcaaaactcacaaatgaactctccgaggtgaacatt
caagatttcggggatcaccttcaagtggagtcgtttcgcgtgtccatttgttcgaaggag
gattgcccttacagattaagtgacaacggtggtgaagagcactatgaaccaatgttcttt
tgctgcagttgggcaatggaagatgagaagcttgcatggaaagtcatctcaatgtgtcaa
aaataa
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