KEGG   Rosa chinensis (China rose): 112195108
Entry
112195108         CDS       T06020                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112195108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcn03041]
    112195108
Spliceosome [BR:rcn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    112195108
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    112195108
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 112195108
NCBI-ProteinID: XP_024191231
LinkDB
Position
3:6041698..6045079
AA seq 387 aa
MANRTDPSAKNIRGTNPQNLIEKIVRTKIYNNTYWKEQCFGLTAETLVDKAMELDHIGGT
FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRVLGAFYLRITGSDTDVYQYL
EPLYNDYRKLRSKLADGRFSLTHVDELIDELLTKDYSCDIAMPRIKKRWTLESIGLLEPR
KSALEEDFEEEEEKEENDQLNGLDDEVHDKEYYRGRSPERERDRDRRRDRDRYRDRDYDR
EYDRDRDYDRERGRGRERDRNRDRDRDRDRYRLRDEKDYGRDRDRDREWDGRERERRDRD
RGRRRSHSRSRSRSREHKDREGGDHRKRHARSISPRRRDGPDDGTREEPRKKKEKKEKKA
DGTDHPDPEIAEANRLRASLGLKPLNV
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggcgaaccgcacggacccctcggcgaagaacataaggggcacgaacccccagaacctg
atcgagaagatcgtacggacgaagatatacaacaacacctattggaaggagcagtgcttc
ggattgacggcggagacgctggtggacaaggccatggagctcgaccacatcggcgggacc
tttgggggtaaccggaagcccacgccgttcatgtgcctcgtcatgaagatgcttcagatc
caacccgagaaggaaatcgtcatcgagttcattaagaacgacgactacaaatatgttcgg
gtacttggtgcattttacttgcgtatcacaggcagcgatactgatgtctaccagtaccta
gagcctctttacaatgactatcggaagttgagaagtaaattggctgatggacgtttctca
ttgactcatgtggatgagcttattgatgaacttctgacaaaggactactcatgcgacatt
gccatgccacgaatcaagaaaagatggactcttgaatcaattggtttgttggaacctaga
aaaagtgctttggaggaggactttgaggaggaggaagagaaagaggagaatgatcagctt
aatggattggatgatgaagtccatgataaggagtattaccgtggccgaagtcctgaaagg
gaaagagacagggatagaagacgtgacagggaccgatacagggatcgtgattatgacaga
gaatatgatagggatagagactacgacagagaacgtggacgtgggagagaaagagatagg
aacagagacagggatagggacagggaccgatatagactgagagatgaaaaggattatggc
cgtgatagggatcgggatagggagtgggatggtagggagcgtgagaggcgagatagggat
cgtggcaggaggaggagccattcaaggagccgaagtaggagtagggagcacaaggatcgt
gagggtggggatcaccgcaagagacatgcccgcagcatcagtcctaggaggcgagatggg
cctgatgatggcactcgtgaggagccgaggaagaagaaagagaagaaggagaagaaggct
gatggcacagaccatcctgatcctgagattgctgaagccaacaggctccgagcatctctt
ggtttgaagccccttaatgtctga

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