Rosa chinensis (China rose): 112195108
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Entry
112195108 CDS
T06020
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112195108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112195108
Spliceosome [BR:
rcn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112195108
Complex C
U4/U6.U5 tri-SnRNP related factors
112195108
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
112195108
NCBI-ProteinID:
XP_024191231
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All DBs
Position
3:6041698..6045079
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AA seq
387 aa
AA seq
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MANRTDPSAKNIRGTNPQNLIEKIVRTKIYNNTYWKEQCFGLTAETLVDKAMELDHIGGT
FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRVLGAFYLRITGSDTDVYQYL
EPLYNDYRKLRSKLADGRFSLTHVDELIDELLTKDYSCDIAMPRIKKRWTLESIGLLEPR
KSALEEDFEEEEEKEENDQLNGLDDEVHDKEYYRGRSPERERDRDRRRDRDRYRDRDYDR
EYDRDRDYDRERGRGRERDRNRDRDRDRDRYRLRDEKDYGRDRDRDREWDGRERERRDRD
RGRRRSHSRSRSRSREHKDREGGDHRKRHARSISPRRRDGPDDGTREEPRKKKEKKEKKA
DGTDHPDPEIAEANRLRASLGLKPLNV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcacggacccctcggcgaagaacataaggggcacgaacccccagaacctg
atcgagaagatcgtacggacgaagatatacaacaacacctattggaaggagcagtgcttc
ggattgacggcggagacgctggtggacaaggccatggagctcgaccacatcggcgggacc
tttgggggtaaccggaagcccacgccgttcatgtgcctcgtcatgaagatgcttcagatc
caacccgagaaggaaatcgtcatcgagttcattaagaacgacgactacaaatatgttcgg
gtacttggtgcattttacttgcgtatcacaggcagcgatactgatgtctaccagtaccta
gagcctctttacaatgactatcggaagttgagaagtaaattggctgatggacgtttctca
ttgactcatgtggatgagcttattgatgaacttctgacaaaggactactcatgcgacatt
gccatgccacgaatcaagaaaagatggactcttgaatcaattggtttgttggaacctaga
aaaagtgctttggaggaggactttgaggaggaggaagagaaagaggagaatgatcagctt
aatggattggatgatgaagtccatgataaggagtattaccgtggccgaagtcctgaaagg
gaaagagacagggatagaagacgtgacagggaccgatacagggatcgtgattatgacaga
gaatatgatagggatagagactacgacagagaacgtggacgtgggagagaaagagatagg
aacagagacagggatagggacagggaccgatatagactgagagatgaaaaggattatggc
cgtgatagggatcgggatagggagtgggatggtagggagcgtgagaggcgagatagggat
cgtggcaggaggaggagccattcaaggagccgaagtaggagtagggagcacaaggatcgt
gagggtggggatcaccgcaagagacatgcccgcagcatcagtcctaggaggcgagatggg
cctgatgatggcactcgtgaggagccgaggaagaagaaagagaagaaggagaagaaggct
gatggcacagaccatcctgatcctgagattgctgaagccaacaggctccgagcatctctt
ggtttgaagccccttaatgtctga
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