Rosa chinensis (China rose): 112195261
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Entry
112195261 CDS
T06020
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112195261
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112195261
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
112195261
NCBI-ProteinID:
XP_024191402
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Position
3:15147966..15150384
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AA seq
462 aa
AA seq
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MMSGDGYSLIPSAMEGFDHQLNPANPSQKSNPVVKKKRNLPGTPDPDAEVIALSPTTLMA
TNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKDVIKKKVYICPEKTCVHHDPSR
ALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKD
SFITHRAFCDALTEESARLTSAAAAATNLNFGNDPTVNNTMINSQAVQDVSQISDFDKPS
RLSFWLNQQPNNLNVMDMAVANPNNLYEMVHMGSATSLFGSNSMSNFGASTSTSSANLSL
SSPIGIKDQERRNIKANIISKPPAAPMSATALLQKAAQLGSTRSSNQPLSGSSVGVMTSP
SSSNTMSFNSRSNELNQLFQSSTTTSSNLVSSLSCSSNSLEQVMKFGGANSNAIDHQNSL
TRDFLGVGDRQIHNRQFLPHELAKFGSMSSAAMGLSPFTGNH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccggtgatggctattcacttataccttctgccatggaagggttcgatcatcaa
ttgaacccagcaaaccctagccagaaatccaatcctgtggtcaagaagaagcggaatcta
ccaggaacgccagatccagatgccgaggttattgccttatctcccaccacacttatggca
acgaacagattcatctgcgagatatgcaacaagggtttccaaagggaccagaacttacag
cttcatcgaagaggtcacaatcttccatggaagcttaggcaaagaacgaacaaggatgtg
atcaagaagaaggtctacatttgccccgagaagacctgcgtccaccacgatccttcgaga
gctcttggggaccttaccggaatcaagaagcatttcagccggaaacacggcgagaagaag
tggaagtgcgagaagtgttcgaagaaatacgcagtccaatcggattggaaagctcactcc
aagacctgcgggactagggagtataagtgcgactgtggaactctattttccaggaaagat
agcttcatcacgcatagagcattttgtgatgccctaactgaagagagtgctaggctcact
tcagctgcagcagctgctacaaatctcaacttcggaaatgatcctacagtaaacaacacc
atgattaattctcaagctgttcaagatgtttctcaaatctctgatttcgacaagcccagc
agattatcgttttggctgaatcagcagccaaacaatctcaatgtgatggacatggcagtt
gcaaatcctaataatctgtatgaaatggtgcacatgggatctgccactagtctatttggc
tcaaattctatgtccaatttcggtgcctctacttcaacaagttctgcgaatctctcctta
tcatcaccgataggaataaaagatcaagaacgcagaaatattaaagccaacattataagc
aagccgccagcagcgcccatgtccgccacagcgctgctgcagaaagcggcccagttgggc
tctactcgaagcagcaaccaaccgctttcgggcagcagcgtaggtgtaatgacctcgcct
tcttcctcaaacacaatgagcttcaacagcaggtcaaatgagcttaaccaactttttcaa
tcgagcactactacttcatcgaatctggttagctcgttaagttgttcatcgaatagtctc
gaacaggtaatgaaattcggtggcgcaaattcgaatgcgattgatcatcagaatagtcta
actagagactttttgggcgtgggagatcgtcaaattcataataggcagttcttgccacat
gagctagccaagtttggttcgatgagttcagctgctatgggactgagtccattcactggc
aatcactga
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