Rosa chinensis (China rose): 112195302
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Entry
112195302 CDS
T06020
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03030
DNA replication
rcn03410
Base excision repair
rcn03420
Nucleotide excision repair
rcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112195302
03410 Base excision repair
112195302
03420 Nucleotide excision repair
112195302
03430 Mismatch repair
112195302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcn03032
]
112195302
03036 Chromosome and associated proteins [BR:
rcn03036
]
112195302
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112195302
DNA replication proteins [BR:
rcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112195302
DNA Replication Termination Factors
ELG1-RFC complex
112195302
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
112195302
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112195302
Check point factors
HRAD17(Rad24)-RFC complex
112195302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
RsgA_GTPase
Mg_chelatase
ABC_tran
AAA_29
AAA_2
RuvB_N
DUF815
AAA_23
AAA_22
AAA_5
AAA_24
T2SSE
AAA_16
SprT-like
TsaE
Hda_lid
Motif
Other DBs
NCBI-GeneID:
112195302
NCBI-ProteinID:
XP_024191476
LinkDB
All DBs
Position
3:complement(46619510..46626585)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDQAMVHQDTAQNLKKLVAEQDCPHLLFYGPSGSGKKTLIIALIRQIFG
PSADKVKVENRTWKVDAGSRTIDIELTTLSSTNHIELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKILVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTEAIRSR
CLNVRINAPTDEQIVKALEFIGKKEGLQLPSGFAAHIAEKSNRSLRRAILSLETCHVQQY
PFTSNQIIPSMDWEEYVSEIVSDIMKEQSPKRLYLVRQKLYELLVNCIPPEIILKRLLYE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKAFLIAAFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggtagacaagtacagacccaaaaccctagaccaggcaatggtccaccaagac
acggcgcaaaacctcaagaaacttgtcgcagagcaggactgcccccatttgctcttttac
gggccttccggctccggcaagaaaaccctaatcattgcccttattcgtcagattttcgga
cccagcgccgacaaggtgaaggtggaaaacaggacatggaaagttgatgctgggagtaga
accattgacatagagctgactacattatcaagcaccaatcacattgaactcaaccccagt
gatgcaggctttcaggacagatacattgttcaagagataattaaggaaatggctaaaaat
agacccattgacacaaaagggaaaaaaggatataaaatcttggtgttgaatgaagttgac
aaactttcaagagaagcacagcattctcttcgaagaactatggagaaatatagtgcttat
tgccgcctaatactatgctgtaacagttcttcaaaggtgactgaagcaatccgatcacgg
tgtctaaatgtgcgaataaatgcaccaacagatgaacagattgttaaggcattggagttc
attggaaagaaagaagggcttcaacttccttctggatttgctgctcatatagctgaaaaa
tcaaacaggagcttaaggagagctatattgtctctagaaacttgtcatgttcaacagtat
ccctttacaagtaaccaaataattccctcaatggattgggaggaatatgtttcagaaatt
gtatctgatataatgaaggagcagagtccgaaaaggctttatctggtgcggcaaaagttg
tatgagctacttgttaattgtatccctccagagatcattcttaagaggctgctttatgag
ttattgaagaaattggatgcagaattgaagcatgaggtctgccattgggcagcatattat
gaacataggatgcgtcttgggcagaaagccatatttcacctcgaagcgttcgtggccaag
ttcatgagtatttataaggctttcctcattgcagcatttggctaa
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integrated database retrieval system