Rosa chinensis (China rose): 112195416
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Entry
112195416 CDS
T06020
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112195416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112195416
03036 Chromosome and associated proteins [BR:
rcn03036
]
112195416
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112195416
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
112195416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
112195416
NCBI-ProteinID:
XP_024191614
LinkDB
All DBs
Position
3:3257285..3266469
Genome browser
AA seq
1206 aa
AA seq
DB search
MEASNNSSSNLAGSVAQAIAVSLDWSSTPDARKAAVAFLESIKTGDVRVLANTAFLLVKK
DWSSEIRLHAFKMLQHLVRLRWEELNPTEHRNFANVTVDLMSEIANPNEEWALKSQTAAL
VAEIVRSEGVDLWQELLPTLVSLSAKGPIQAELVSMMLRWLPEDITVHNEDLEADRRRLL
LRGLTLSLPEILPLLYNLLERHFGAAMSEAGKQQVDLAKQHASAVTATLNAVNAYSEWAP
LPDLAKYGIIHGCGFLLSSPDFRLHACEFFKLVSPRKRHVDTSTPEFDSAMSTVFHILMN
ASKEFLYSSGVNAGVIDESNIEFAEYLCESMVSLGSTNLQCIVGDSTTLPLYLQQMLGFF
QHHKLVLHFQSLNFWLALMRDLMSKPPKSKVAAHSSADGSDQADKEKQKILSFVNDDICS
ALLDVSFQRLLKREKILHGTSISLGSLELWSDDVDSKGTFGQYRSKLLELIKFVTSYKPV
IAGAKVSERIDTIIKSLLLSPMPAQDLAVMESMQSALENVVSTIFDRSNEIGGGHSEVQL
GLCRIFEGLLQQLLSLKWTEPVLVEVLGHYLDAMGPFLNYFPDAAGSVINKLFELLNSLP
FAVKDPSTSSARYARLQICTSFIRIAKTADKSILPHMKGIADTMAYLQKEGRLLRGEHNL
LGEAFLVMASAAGFQQQQEVLAWLLEPLSQQWVQIEWQNNYLSEPLGLVRLCMETPTMWS
VFHCITFFEKALKRSGTRKTHLSSQNNSAASSTPLHPMASHLSWMLPPLPKLLRAIHSLW
SPSVSQTLPGEMKAAMTMSDVEQYSLLGEGNPKLSKGTLTSGPGSLVTMSKEGYTEPNES
DIRNWMKGIRDSGYNVLGLATTVGDTFYKCLDSHSVALALVENIQSMEFRHIRPLVHSVL
IPLVKNCPVDLWEVWLEKLLHPLFLHSHQALCCSWSSLLQEGRAKVPDVHAILAGTDLKV
EVMEEKLLRDLTREICSLLSAIALPQLNTGLPSLEHSGQISRVDLSSLKSLDSFASSSMV
SFILKHQGLALPALQICLEAFTWTDGDAMTKVSSFCGALVVLAIFTNSVELQQFVCKDLF
SAIIQGLALESNAFISADLVGHCRDIYIYLCDRHPAPRQILLSLPCIKQHDLLAFEEALT
KTASPKEQKQYMKSLLLLATGNKLKALVAQKTVNVITNVSAKPRNTVNVAETRVDEGEVI
GLAALS
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgagcaacaatagcagcagcaacctagctggcagcgttgcccaagccattgcc
gtctctctcgactggagctccacgcccgacgctcgcaaagccgccgtggcttttcttgaa
tcgattaaaactggagatgtgcgtgttttggcaaatacagcgttccttctagtgaaaaag
gattggtcttctgaaattcggttgcatgcatttaaaatgttgcagcatttggtccggttg
cggtgggaggaactaaaccctacagaacatagaaactttgctaatgtcactgttgatcta
atgtctgaaattgcaaatcctaatgaagagtgggctttgaaaagtcagacagcagcactt
gttgctgagatagttagaagtgaaggagtagatctctggcaggaactgcttccaactctg
gtttccttatctgcaaagggtcctatacaagctgagttggtctccatgatgctgaggtgg
cttcctgaagacattactgttcacaatgaagatttggaagctgatcggagaaggctattg
ttgcgtgggctgaccctatccttacctgaaattttacctctattatacaacttgctagag
aggcattttggagctgccatgagtgaagcagggaaacaacaagtggaccttgcaaaacaa
catgcatctgcggtaacagctactttaaatgctgttaatgcatattctgaatgggctcca
ttgcctgatcttgctaaatatggtataattcatgggtgtggtttcttactttcttcacct
gacttccgtcttcatgcttgtgagtttttcaaacttgtttccccaagaaagagacatgtt
gatacatcgactcctgaatttgattctgcaatgagtactgtctttcatattttaatgaat
gcctccaaagaatttttgtacagctctggcgtcaatgctggggtgattgatgaaagcaat
attgaatttgcggaatatttatgtgaaagtatggtgtctttgggttcaacaaacttgcaa
tgtatcgtgggtgatagcaccacattacctctttatttacaacagatgctcgggtttttt
caacatcataagctagttcttcattttcaatctctcaatttttggctggcacttatgaga
gacttaatgtctaagccacctaagtcaaaggtggctgcacactcatcagctgatggttct
gaccaggctgataaggaaaagcagaagattttgagttttgtgaacgatgacatatgtagt
gcacttctggatgtatctttccaacgattgctcaagagagaaaagattcttcatggaaca
tcaatctctttggggtcattggagttatggagtgatgatgttgacagcaaaggaactttc
ggccagtatcgctcaaagctgttggaactgatcaagtttgttacctcatacaagcctgtt
atagctggtgctaaggtttctgaaagaattgatacaatcattaaaagcctcttgctttct
ccaatgcctgctcaggacttagctgtgatggaaagcatgcagtcggctcttgaaaatgtt
gtaagcactatttttgatagatcaaatgaaattggtgggggccattctgaagttcaacta
ggactatgcagaatattcgaaggtttgcttcagcaacttctctctttgaagtggactgag
ccagtccttgtggaagtacttggtcactacttggatgcaatgggtccatttttgaactat
ttcccagatgcagcaggcagcgtcatcaataaactatttgagctcctaaactcactccct
tttgctgttaaggatccctctacaagtagtgcacgatatgcaaggttgcaaatttgtaca
tcgtttattcgtatagcaaaaactgctgacaaaagtattcttcctcacatgaagggtata
gctgataccatggcatatttgcaaaaggaaggtcgtttacttcgtggtgaacataatctt
ctaggcgaagcatttcttgtcatggcttctgctgctggatttcaacagcagcaagaagtt
ttggcctggttactagaacccttgagccagcaatgggtacagatagagtggcaaaataat
tatttatctgaaccactaggtcttgttcgtttgtgcatggagaccccaactatgtggtca
gttttccactgtatcacattctttgagaaggcacttaagagaagtggaacccggaaaaca
catttgagttcacaaaacaactcagccgcaagttctactcccttgcatcctatggcttct
catctatcatggatgctgccacctcttcccaaacttcttcgtgccatacattccctttgg
tctccatctgtatctcaaactctacctggagaaatgaaagctgcaatgaccatgagcgat
gttgagcaatacagtcttcttggtgaaggaaaccctaaattgtcaaagggtacattaacc
tctggtcctggatctcttgtcaccatgagtaaggaaggatatacagagccaaatgaatcg
gatatacgaaattggatgaaagggatcagagacagtgggtacaatgtattgggcctggca
accactgttggggacacattctacaaatgtttggacagtcattctgttgctctagctttg
gttgagaatatacagtcaatggaattcaggcatataagaccgcttgttcattcagttttg
attcctttggttaaaaattgccctgtggatttgtgggaggtatggctggaaaagctcttg
cacccattatttctacactcccatcaggctctttgttgctcctggtccagtcttctacaa
gaaggtagagcaaaggttccggatgtccatgccattcttgctgggacagacttaaaagtg
gaagtaatggaagaaaagctactaagagatcttactcgagagatttgttcactcctctct
gccattgctttgccacagctaaatactggccttccatccttggagcactctgggcaaatc
agccgagtcgatctatcttcactcaagtctttagattcttttgcatcgagctctatggtt
agtttcattttgaagcaccaaggtcttgcccttccagcactgcagatatgtttagaagct
tttacatggacagatggtgatgccatgacaaaagtttcttccttttgtggtgctttggtt
gttctagctatattcacaaatagtgtggaactccaacagtttgtttgtaaggatctcttt
tctgcaattattcaaggtttagcccttgaatcaaatgctttcatcagtgctgatttggtt
ggtcattgccgtgacatttacatatatctttgtgatagacatcccgctccgaggcagatt
ctgctctcacttccctgcatcaaacagcatgatttgcttgcttttgaagaagctttgacg
aagacagctagtcctaaagagcaaaaacaatatatgaaaagcctgctattattagctacc
ggaaacaagttaaaagcacttgttgctcagaaaactgtaaatgttataacaaatgtatca
gcaaagcctcgcaacacagtcaacgttgcagaaaccagagttgatgagggggaagttatt
ggactggcagccctatcatga
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