Rosa chinensis (China rose): 112195783
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Entry
112195783 CDS
T06020
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
rcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112195783
03015 mRNA surveillance pathway
112195783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112195783
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112195783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
112195783
NCBI-ProteinID:
XP_024191746
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All DBs
Position
4:56772115..56779320
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AA seq
617 aa
AA seq
DB search
MTMGGVKLELRCPKKVYSVAIDPNPDWTFEDLVSELNALEIKINSGSKVPLPFAKDKSRD
ISNWKSNGRNSSSPFVMRVFEDDMDDIDAEDEEVHDQKSMVAKRFNFDELYLSDSDDSGD
ESSFGAEPYLMEKVDLVESGLLELSREHQFKVKEEIRNQISALETDLKSETDKSISALVR
VEKYRKERSEMDRKLDTQYQRKIAEALDNHLTVVQRDLEVRSQIEERKIRIDAAYEDAKR
KEAEEKLRQERAKAEAEAKRVEEAKRAEEAKRAALEAQRRAANEAAAKKASEASKRPDTD
ANLGTSNAQSGGPQVNKPAAGANKIRAAESALNLEQRRLQKLKQLDEEVQALRSSSNENF
GKYERQIAKLIQQITGTTENVRQKEYDLLKIFCDARCPQSIKTAALAKKVVSNCKRPGNP
AFAQAFVIVRITSKVPHAMDLILAELHKACIYTVPKHYSRSAFGSNEAYYKALGFQEDDE
GKIESVDSYLTRLESYMKLYGALVQQTEIDNVHGLKEGWAWLARFVNALPANRYTAVALA
AFLRMAGYSLFRKYRNQFVKLLNMVADNFLNALKEQGDSQLSPVIVEIDSYIKDREFLRE
PEGRQLKSNLQSDLSVP
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgggaggtgttaagttggaacttcgttgtcccaaaaaagtatacagtgttgca
attgaccctaaccctgattggacctttgaggatctagtttcggagctaaatgccctcgaa
atcaagatcaacagcggttctaaggtcccactcccttttgctaaagataaatcaagggat
atatccaattggaagagtaatgggagaaattctagcagcccgtttgttatgcgtgtgttt
gaggatgacatggacgacattgacgccgaagatgaggaggttcatgatcagaaatccatg
gttgctaaacggtttaattttgatgaactctatctcagtgacagtgatgattctggtgac
gaatcatcttttggcgccgaaccttacctaatggagaaggttgatctagtggaaagtggt
ttgctcgagctatcccgtgaacatcagttcaaagttaaggaggaaattaggaaccaaata
tcagcattagagacagatctgaagagtgaaactgacaagtctatttctgcacttgttcga
gttgagaaatatagaaaagaaagatctgaaatggatagaaaactagacactcaatatcaa
cgcaagatagcggaagcacttgataatcacttaactgttgtccagcgagaccttgaagtc
agatctcaaatagaagaaagaaaaataagaattgatgcagcttatgaagatgctaaacga
aaggaagctgaagaaaagcttcgacaagaacgagctaaagcagaagctgaggcaaaaaga
gttgaggaagcaaaaagagctgaggaagcaaaaagagctgctttggaagctcagagaaga
gcagctaatgaagctgcagcaaaaaaagcttctgaagcctcaaagaggcctgatactgat
gccaatttgggaacttctaatgctcaatccggtggacctcaagtaaataagccagcagca
ggagctaacaaaatcagggcagctgaaagtgctttaaatttagagcagaggagactacaa
aagttaaaacagttggatgaagaagtccaggcactaagatcaagttccaacgagaatttt
gggaagtacgagaggcaaattgctaagttgatccaacaaattacaggaacaacagaaaat
gtcagacaaaaagaatatgatctactcaagatcttttgcgatgcacgttgcccgcaatct
atcaaaactgcagcattggcaaagaaggtcgtctccaactgtaaacgcccggggaatcct
gcatttgcacaagcattcgtcattgttcgcattacttcaaaggttccacatgcaatggac
cttatccttgctgagttacacaaagcttgcatctatacagttccaaagcactactcacgg
tcagcatttggatcaaatgaggcttattataaagctcttggattccaagaagatgatgaa
ggaaagattgagagcgttgacagttatttgacacgattagaatcttatatgaagctatat
ggggcacttgttcagcagacggagatcgataatgtacatggcctgaaagaaggttgggca
tggcttgcaaggtttgtgaatgctcttcctgcgaacagatatactgccgttgcacttgca
gcattcctacgtatggcgggttattctctcttcagaaagtatagaaatcaattcgtgaag
ttgttgaacatggttgcagacaacttcttgaatgcactaaaagaacaaggagattcacag
ctaagcccagttattgtagaaattgactcctacataaaggacagggaattccttcgtgag
cctgagggaaggcaattgaagagcaatttgcaatcagatctttctgtgccgtaa
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