KEGG   Rosa chinensis (China rose): 112195783
Entry
112195783         CDS       T06020                                 
Name
(RefSeq) protein GLE1 isoform X1
  KO
K18723  nucleoporin GLE1
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03013  Nucleocytoplasmic transport
rcn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112195783
   03015 mRNA surveillance pathway
    112195783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112195783
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     112195783
SSDB
Motif
Pfam: GLE1
Other DBs
NCBI-GeneID: 112195783
NCBI-ProteinID: XP_024191746
LinkDB
Position
4:56772115..56779320
AA seq 617 aa
MTMGGVKLELRCPKKVYSVAIDPNPDWTFEDLVSELNALEIKINSGSKVPLPFAKDKSRD
ISNWKSNGRNSSSPFVMRVFEDDMDDIDAEDEEVHDQKSMVAKRFNFDELYLSDSDDSGD
ESSFGAEPYLMEKVDLVESGLLELSREHQFKVKEEIRNQISALETDLKSETDKSISALVR
VEKYRKERSEMDRKLDTQYQRKIAEALDNHLTVVQRDLEVRSQIEERKIRIDAAYEDAKR
KEAEEKLRQERAKAEAEAKRVEEAKRAEEAKRAALEAQRRAANEAAAKKASEASKRPDTD
ANLGTSNAQSGGPQVNKPAAGANKIRAAESALNLEQRRLQKLKQLDEEVQALRSSSNENF
GKYERQIAKLIQQITGTTENVRQKEYDLLKIFCDARCPQSIKTAALAKKVVSNCKRPGNP
AFAQAFVIVRITSKVPHAMDLILAELHKACIYTVPKHYSRSAFGSNEAYYKALGFQEDDE
GKIESVDSYLTRLESYMKLYGALVQQTEIDNVHGLKEGWAWLARFVNALPANRYTAVALA
AFLRMAGYSLFRKYRNQFVKLLNMVADNFLNALKEQGDSQLSPVIVEIDSYIKDREFLRE
PEGRQLKSNLQSDLSVP
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgacaatgggaggtgttaagttggaacttcgttgtcccaaaaaagtatacagtgttgca
attgaccctaaccctgattggacctttgaggatctagtttcggagctaaatgccctcgaa
atcaagatcaacagcggttctaaggtcccactcccttttgctaaagataaatcaagggat
atatccaattggaagagtaatgggagaaattctagcagcccgtttgttatgcgtgtgttt
gaggatgacatggacgacattgacgccgaagatgaggaggttcatgatcagaaatccatg
gttgctaaacggtttaattttgatgaactctatctcagtgacagtgatgattctggtgac
gaatcatcttttggcgccgaaccttacctaatggagaaggttgatctagtggaaagtggt
ttgctcgagctatcccgtgaacatcagttcaaagttaaggaggaaattaggaaccaaata
tcagcattagagacagatctgaagagtgaaactgacaagtctatttctgcacttgttcga
gttgagaaatatagaaaagaaagatctgaaatggatagaaaactagacactcaatatcaa
cgcaagatagcggaagcacttgataatcacttaactgttgtccagcgagaccttgaagtc
agatctcaaatagaagaaagaaaaataagaattgatgcagcttatgaagatgctaaacga
aaggaagctgaagaaaagcttcgacaagaacgagctaaagcagaagctgaggcaaaaaga
gttgaggaagcaaaaagagctgaggaagcaaaaagagctgctttggaagctcagagaaga
gcagctaatgaagctgcagcaaaaaaagcttctgaagcctcaaagaggcctgatactgat
gccaatttgggaacttctaatgctcaatccggtggacctcaagtaaataagccagcagca
ggagctaacaaaatcagggcagctgaaagtgctttaaatttagagcagaggagactacaa
aagttaaaacagttggatgaagaagtccaggcactaagatcaagttccaacgagaatttt
gggaagtacgagaggcaaattgctaagttgatccaacaaattacaggaacaacagaaaat
gtcagacaaaaagaatatgatctactcaagatcttttgcgatgcacgttgcccgcaatct
atcaaaactgcagcattggcaaagaaggtcgtctccaactgtaaacgcccggggaatcct
gcatttgcacaagcattcgtcattgttcgcattacttcaaaggttccacatgcaatggac
cttatccttgctgagttacacaaagcttgcatctatacagttccaaagcactactcacgg
tcagcatttggatcaaatgaggcttattataaagctcttggattccaagaagatgatgaa
ggaaagattgagagcgttgacagttatttgacacgattagaatcttatatgaagctatat
ggggcacttgttcagcagacggagatcgataatgtacatggcctgaaagaaggttgggca
tggcttgcaaggtttgtgaatgctcttcctgcgaacagatatactgccgttgcacttgca
gcattcctacgtatggcgggttattctctcttcagaaagtatagaaatcaattcgtgaag
ttgttgaacatggttgcagacaacttcttgaatgcactaaaagaacaaggagattcacag
ctaagcccagttattgtagaaattgactcctacataaaggacagggaattccttcgtgag
cctgagggaaggcaattgaagagcaatttgcaatcagatctttctgtgccgtaa

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