Rosa chinensis (China rose): 112195994
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Entry
112195994 CDS
T06020
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112195994
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
112195994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
112195994
NCBI-ProteinID:
XP_024192016
LinkDB
All DBs
Position
4:complement(64524465..64534562)
Genome browser
AA seq
1602 aa
AA seq
DB search
MDQNQRSSSASASRAYQFHPARAAIVNLFDLYLGGKSSSRQKSEDSNREPPNKSQKRVLA
LNRELPPRNEQFILDFEQLQSQFPDQDQLRVVTESVLISLVVQCSNHAPRAEFLLFALRS
LCTIGHINWDSFLPSLLSSVSTAEMSMGQGSQAMTGISSQSSMLPSSNAIPNASNFQSSN
PASPLPSVHGIGSPSQTAIEPMTLSPAKSSDMSSNGQQAAARANSSIRDNAISSLRQLCC
KIILTGLEFNLKPATHADIFSHMLNWLVNWDQKQLGADESDGIKSWRPGKALIEWLHSCL
DVIWLLVDEDKCRVPFYELLRSGLQFMENIPDDEALFTLILEIHRRRDMMAMHMKMLDQH
LHCPTFGTHRIFSQTTPSISGEAVASLRYSPITYPSVLGEPLHGEDLAISIPKGSLDWER
ALRCIRHAICTTPSPDWWKRVLLVAPCYRGPSQGPTPGAVFTSEMICEATIDRIVELLKL
TNSDVNCWQDWLVFSDIFFFLIKSGCVDFVYFVDKLVSRLTESDPHILKTNHVTWLLAQI
IRVELVINALNSDARKVETTRKILSLHKEDRSSDPNSPQSILLDFISSCQNLRIWSLNTT
TREYLNNEQLQKGKQIDEWWRHASKGDRIMDYMNMDDRSIGMFWVVSYTMAQPACETVIN
WLTSAGVAESLPATNLQSNERLMVMREVNPLPMSLLSGFAINLCLKLAYQMEESLFCGQV
VPNIAMAETYCRLLLIAPHSLFRSHFNHLAQRSPSVLSKPGVTLLVLEILNYRLLPLYRY
QGKSKALMYDVTKIISALKAKRGDHRVFRLAENLCMNLILSLRDFFLVKREGKGPTEFTE
TLNRVTVVTLAIIIKTRGIADADHLHYLQTMLEQILVSSNHTWSEKTLRYFPSLLRDFLI
PRIDNRGIAIQAWQQAETTVINQCNQLLSSSADPTYVMTYISHSFPQHRQYLCAGAWILM
QGRPENINSVNLARVLREFSPEEVTANIYMMVDVLLHNIQLEHQRGHSLQDLLVKACANL
TFFIWTHELLPLDIMLLALIDRDDDPHALRIVISLLDRQELQQRVKLYCMNRGAPEHWLY
PGPFKRVELQTALGNHLSWKDRYPAFFDDIAARLLPVIPLIIYRLIENDAIDSADRVLAM
YTQFLAYHPFRFTFVRDILAYFYGLLPPKLIVRILNVLDISKIPLSESFPQHINSSNPVI
CPPPDYFATLLLGIVNNVIPPLHNNSKSGSASDGLNSSMRAPPNKTPATSQSGQTNASDG
QKAFYQIQDPGTYTQLVLETAVIELLSLPVSASQIVSSLVQIVVNIQPTLIQSSNGLHGA
TNGVGQGSVLPTSPSGGSTDSLGTNRSSPSVSGINVSSFVSRSGYTCQQLSCLLIQACGH
LLAQLPPDFHKQLYMEASRIIKETWWLSDGKRSLGELDSAVGYALLDPTWAAQDNTSTAI
GNIVALLHSFFSNLPLEWLEGTHLIVKHLRPVTSVAMLRIAFRIMAPLLPKLANAHNLFN
KTLSLIFNMMADVFGKNAQPSTPVEPLEVTDLIDFFHHIVHYEGQGGPVQAPSKPRPEVL
VLCGRAAESLRPEIQHLLSHLKPDTNSSIYAATHPKLAQNTS
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaccagagatcgtcgtcggcctcagcttcgcgagcttaccagttccaccct
gctcgcgctgcaatcgtcaatctcttcgacctctacttaggaggaaagagcagtagtcgc
cagaaatcagaggattcaaatcgcgaacctccgaacaagtcacagaagcgtgtgcttgcg
ctcaatagagaacttcctcctcgaaacgagcagttcattctcgatttcgagcagctccag
agccagtttcctgaccaagatcaactgcgtgttgtgacagagtctgtgcttatatctcta
gttgtgcagtgcagtaatcatgcaccacgggcagagtttcttctctttgctttaaggagt
ttgtgcacaataggtcacattaactgggatagttttttgccgtcccttctttcttctgtc
tccacggcagaaatgtcaatgggtcaagggagtcaagcaatgacgggtatttcatcacag
tccagtatgcttccaagttcaaatgcaattcccaatgcatctaactttcaatcttcaaat
cctgcctctccattaccttctgttcatggaattggttcccccagccagacagctattgaa
cctatgactctgtcacctgctaaatcatctgatatgtccagtaatggacagcaggctgca
gcaagggccaattcatctataagagataatgcaatcagcagtctacgtcagttgtgttgc
aaaattattttgactggactggaatttaatttaaaaccagcaactcatgcggacatattt
tctcatatgctgaattggctggttaattgggatcaaaaacaactgggggctgatgaatct
gatggcataaagtcttggagacctgggaaggcactaattgaatggctgcatagctgtttg
gatgtcatttggcttttggttgacgaggataaatgccgagttcccttctatgaattactg
cgcagtggcttgcaattcatggagaacatacctgatgatgaagctttgtttactctaatc
ttggagatccataggaggcgagatatgatggctatgcacatgaaaatgctagatcaacac
ttacattgccctacatttgggactcatcgaattttctcgcagactactcctagtatttca
ggtgaagcagtggcaagcttgcggtattcaccaatcacatatccaagtgtacttggggaa
ccattgcatggagaggatcttgcaatttctattccaaaaggaagtttagattgggagaga
gcgttgcgttgcataaggcatgctatttgtactactccatcacctgactggtggaaacgt
gtgctgcttgtggctccttgttataggggtccttctcaaggacctactcctggtgctgtt
ttcacttctgaaatgatttgtgaggcaacaattgatagaattgttgagctactgaagttg
acaaattcagatgttaattgctggcaagactggcttgtcttttcagatatattctttttt
ctcataaaaagcggctgtgttgatttcgtctattttgtggacaagctagtttcacgcctt
acagagagtgatccccatattcttaagaccaatcatgtcacttggcttctagctcaaatt
attcgggttgagcttgtgataaatgctctaaattcagatgctagaaaggtagagacaact
cggaagatcctatcgcttcataaagaagatagaagctcagatccaaatagtcctcagagt
atcctgcttgactttataagcagttgccaaaatttacgtatttggtcattgaatacaaca
actagagaatatctgaataatgagcagcttcagaaaggaaagcaaatagatgaatggtgg
agacatgcaagcaaaggggatcgtataatggattatatgaatatggatgataggtcaatt
gggatgttttgggttgtatcttacactatggcgcaaccagcttgtgaaactgtgatcaat
tggttaacctctgctggagttgcagaatcgttaccggcaacaaacctacagtccaatgag
aggttaatggttatgcgggaagtcaatccattgccaatgtcattgttatctggctttgca
ataaacctgtgtttaaaactggcgtatcaaatggaagaatctttgttttgcgggcaggtt
gtacctaatattgcaatggctgaaacatattgcaggttactgctcattgcacctcattca
ctattccgttctcatttcaatcatttggcacaaaggagtccttcagtattgagcaagccc
ggcgttactcttttggtgcttgaaattttgaactatcgtttgcttccactttacaggtac
cagggaaaaagcaaagccttgatgtatgatgtaacaaaaataatctctgctctgaaagca
aaacgtggagaccatcgtgtatttagattggccgagaacttgtgcatgaatcttattctg
tcactgagagatttcttcttagtgaaaagggaagggaagggtccaactgaattcacagaa
actttgaatcgagtaactgtggtcactcttgctatcatcatcaagacaagaggaattgct
gatgctgatcatctgcattatcttcaaactatgttagagcagatattagtttctagtaac
catacatggtcagagaaaacactacgctatttcccttcgcttcttcgtgatttcttgatt
cctcggatagataacaggggcattgcaattcaagcatggcagcaggcagaaaccactgtg
atcaaccaatgcaaccagcttctgtcatcatcagctgatcctacttatgttatgacctat
ataagtcatagttttcctcaacaccgacaatatctatgtgctggagcatggatcctgatg
caagggcgcccagagaacataaatagtgtaaacctggcacgtgtcttgcgagagttttcc
cctgaggaagtaactgctaatatttacatgatggtggatgtgctactccataacattcag
ttagaacatcagcgcgggcattccttgcaggaccttctagtgaaagcatgtgcaaaccta
acattttttatttggacccatgagttacttcctttggatattatgcttctggcacttatt
gatcgggatgatgatccccatgctttgcgtattgtgattagtttacttgataggcaagaa
cttcaacaaagagtaaaactatattgtatgaatcgaggcgcccctgaacactggctttac
cctggacccttcaaacgagttgaattgcagacagcccttggaaatcatctttcttggaag
gataggtatcctgcattcttcgatgacattgcagcgcgtttgcttccggtcattccacta
ataatttatagactaattgaaaatgatgccatagattcagcggacagagttctggccatg
tatactcaatttcttgcttaccacccttttagatttacatttgttcgtgacattcttgca
tatttctacggccttcttcccccaaagcttattgttcgaattctgaatgtacttgatatc
agcaagatcccattgtctgagtcatttccgcagcacatcaattcatcaaatcctgtcatc
tgcccacctccagattactttgcaactctcctactgggaatagtgaataatgttatacct
ccattacataacaactcaaaatctggatcagctagtgatggtttaaatagttcaatgcgt
gctccacctaacaagactccagcaacctctcaatctgggcaaacaaatgcttctgatggc
caaaaagcattttatcaaattcaggatccaggcacatatactcagctggttcttgaaaca
gcagtcattgaattactgtctcttccggtatctgcatcccagattgtatcatctctggtt
caaattgtcgtcaatatacaaccgacgctaattcaatccagcaatggcctgcatggagct
acaaatggtgttgggcaaggctcagtgttaccaacatccccttcaggtggaagcacagat
tccttgggcacaaacagatcaagtccttcagtttctggaataaatgtttctagctttgtt
tctcgaagtggttatacatgccaacaattgtcttgcttattgatccaagcatgtggccat
ctactggctcagctccctcccgattttcataaacaactctatatggaggcatcacgtata
ataaaagaaacatggtggctcagtgatggcaagagatcactaggggaactagactctgct
gttggttatgctttgttggacccaacatgggctgctcaagacaacacctcaacagccatt
ggtaatattgttgctctgcttcattcatttttcagtaacctcccactggaatggctagaa
gggacccatcttatcgtcaaacatctcaggccagtgacatcagttgcaatgttgagaata
gcattccgtataatggctccgttgctcccaaagcttgccaatgctcacaacctcttcaat
aagaccctctcattgattttcaatatgatggcggatgtctttgggaagaatgctcagcca
tcaactcctgttgagccactagaagtgacagatcttatagacttcttccatcatatcgtc
cactatgaaggacaaggagggcctgtgcaggctcccagcaagccgagaccagaggtttta
gttctgtgtggaagagctgccgaaagtctacgtccagagattcagcatcttctttcgcac
ttaaaacccgacacaaattcttccatttatgctgctactcatcctaagttggcacagaac
acatcgtaa
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integrated database retrieval system
