KEGG   Rosa chinensis (China rose): 112196097
Entry
112196097         CDS       T06020                                 
Name
(RefSeq) DNA repair protein RAD5B isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112196097
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    112196097
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 RING_XB3-XBAT31 zf-C3HC4_3 zf-RING_2 ResIII DEAD AAA_34 zf-RING_5
Other DBs
NCBI-GeneID: 112196097
NCBI-ProteinID: XP_024192178
LinkDB
Position
4:complement(7017956..7023746)
AA seq 953 aa
MDTEHVADRHKVPSVIGEPTNSDQEIPTAVTVKRTNTSSGARVSTLIKQKCIEDFDEVAE
SRSTLIPEPKVKRVKKEVPDCELVSVQQVRPQNLEDGDFKIEPDWFLVGSTSVSAVSTSK
GMKLLDNEIVHLSFPSSNSSYKTQWIVRFSTKRSGEIGRFPMEWAKCVVPLVNSGKVKVL
GRFMGVPKFLSMMQEIILSVSFYVHHSISAAVEVSSCKREDSYPFLTLFKLLKLQPYQKC
DLDEAVKQRKGSQQYTLENRDEEATSESSLNNVGGAADACNLKEKEPPSTLKFNLRPYQK
QALHWMSEFEKGIDVEKSAPTLHPCWEAYRICDERASFIYVNMFSGEATTHLPTATETPR
GGILADAMGLGKTEMTIALILARPRRGNSDSIEITKKRKIDPDTVTTLKPKGGTLVVCPS
VLKWKDALKTHSESESISTLVHVWRTISPVVISEQDVVLTDYDFLIDDYYTYGENSVLHQ
VDWYRVVLDEADTLGSSRAKKAAKVASMLSSLCRWWLTGTPLKIDLEDIYSLLCFLHVEP
WSYWACWKKLIQTPYEHGDPRGLRLIKDILRPLMLRRTKKAKEKDGSPILILPPDIETIE
CHQSEAEQEFYDALFKRSKVLFDQFVAQGKVLHNYENALGLLLCLRQCCNHPFFVSSQHD
SQNFADLDKPARRFLETHHDSPSSDQILPTQLHVGEVVERICRVGNTVCPICLDCTYDPV
LTPCGHKMCRECLFSRWERQRWALGRFGINQCQVCWDWMDKTELKTCTLENCFQVGVEEN
WKESSKVSKLLDILEQILQSGSDEKCIIFSQWTSFLDLLEISMKRRNIVFQRIDGNLSED
KRDRILKDFSLYRTKDKQVLLICLRTEAGYDLSAASNIFLTDPWWNPAAEEKILMRIIRS
RQHPTVVRRFIVKDTVEERMQQLQSRKQQMSVEVVPVEKDRSARIEDLKMIFR
NT seq 2862 nt   +upstreamnt  +downstreamnt
atggatacagaacacgtggctgatcggcacaaagtcccatcagttatcggtgagcccacc
aattccgatcaagaaattccgacggccgtgacggttaagcggacgaatacaagctccggg
gctcgcgtttcgactcttatcaagcaaaagtgcattgaggattttgatgaagttgcggaa
agtcgaagcactttgattccggagcctaaggtcaagagggtaaagaaggaagttcctgac
tgtgaactggtgtcagtgcaacaggtgagacctcagaatttggaggatggcgatttcaag
attgagccggattggttcttggtgggaagcacatcggtttctgcggtttcgactagtaaa
ggcatgaaattgttggacaatgagattgttcatctctcttttccttcctcaaattccagc
tacaaaacccaatggattgttcgtttttcgacgaaaagatcaggagagattggtcggttt
ccaatggaatgggcaaaatgtgttgttcctcttgtgaattcgggtaaggttaaagtcctt
gggcggtttatgggtgtgccgaaattcctatctatgatgcaagagatcatattgtccgta
agtttttatgttcatcattcaatttccgctgctgttgaggtgtcttcatgcaagcgagag
gattcttatccttttctcaccttgttcaaattgctgaaactccaaccatatcagaagtgt
gatctggatgaagctgtcaaacaaagaaagggtagccaacagtatacattagaaaacaga
gacgaagaagccacttcagagtcttctctaaataacgttggtggtgctgcagatgcgtgt
aacttgaaggagaaggaacccccaagtactctcaagtttaatctgaggccataccagaaa
caagcactccattggatgtcagaatttgagaaggggattgatgttgagaagtcagcacca
actcttcatccttgctgggaggcctatcgtatatgtgatgagagggcttctttcatctat
gtgaacatgttctcaggggaggcaaccacacacttaccaactgcaacagaaacgccaaga
ggaggaattctagcagatgcaatgggactggggaagacggaaatgacaattgctctaata
cttgcaagaccaaggagaggaaactctgatagtattgaaattactaagaagagaaagata
gatccagatacagtgacaacattaaagccaaagggaggcactcttgttgtctgtcctagt
gtgctcaagtggaaggatgcgcttaaaacccattcagagtcagaaagtatttccactttg
gtccatgtttggagaaccatcagccccgtggtaatttcagaacaagatgtggtcttgact
gactatgattttctgattgatgattattatacgtatggcgagaacagtgttttacaccag
gttgactggtatagggtggtgctcgatgaagctgatactcttggatcttcaagggcaaaa
aaagctgctaaggttgcttctatgttgtcctctctttgccgatggtggttgacaggaacc
cctcttaagattgatttggaagacatctacagcctcttatgtttcttgcatgttgagcca
tggagctactgggcatgctggaagaaattaattcagacaccttatgaacatggtgatcca
agaggattgagattgataaaggacattttgaggccattgatgttaagaagaacaaagaag
gcaaaggagaaagatggaagccccatactcattcttcctcctgacattgaaaccattgag
tgtcatcagtctgaagctgaacaagagttctatgatgccctttttaagagatcaaaagtt
ctgtttgaccagtttgtggcacaaggcaaggttcttcacaactatgaaaatgcccttggg
ctactgctttgtttaaggcagtgttgcaaccacccattttttgtttcaagtcagcatgat
tcacaaaactttgcagacttggacaagcctgctagaagattccttgaaacccatcatgat
tctccaagttcagatcagattctccccacccaattacatgtcggagaggttgttgagcgt
atctgtcgggttggaaatacagtgtgtcccatatgcttggattgcacatatgatcctgta
cttacaccatgtggacataagatgtgcagggagtgtctgttctcaaggtgggagagacag
agatgggcccttggtcgttttggcattaatcaatgccaagtatgttgggattggatggac
aaaactgagctcaaaacttgcacattagaaaactgcttccaggttggagttgaggaaaac
tggaaggagtcttctaaggtttcaaagctcttggacatcttggaacaaattcttcagtca
ggttctgatgaaaagtgcatcattttcagtcagtggacttcatttttggatctcttggag
atctctatgaagagaagaaatatcgtgtttcagaggattgatggcaatctgtcagaggat
aagagggataggattttgaaggacttcagcctttaccgcaccaaagataaacaggtcttg
ttgatatgtttaagaactgaagctggttacgacttaagtgcagcatctaatattttttta
acggatccatggtggaatccggctgccgaggagaaaatactaatgagaattatacgcagt
agacaacatccaactgtggttagaagatttattgtcaaggacacagtggaggaacgcatg
caacagcttcagtctagaaagcagcaaatgagtgtggaagttgtccctgttgagaaagat
cgatcggccagaattgaggacctcaaaatgattttcagatga

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