Rosa chinensis (China rose): 112196138
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Entry
112196138 CDS
T06020
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112196138
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
GFD1
Motif
Other DBs
NCBI-GeneID:
112196138
NCBI-ProteinID:
XP_024192210
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Position
4:53657007..53660331
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AA seq
609 aa
AA seq
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MIPSYDPHDSEYGLKLLEDLTTNAYEVQQKVLEEILAKNAQTDYLKSFLNGHYDKKLFKQ
KVPVVNYEDVKPYIERIANGEPSEIISAQTITELLTSSGTSGGQPKMMPSTAEDLERKTF
FYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLVARPVLTSYYKSSNFRNRPFNRF
NVYTSPDETILCSDSKQSMYCQLLCGLVQRDQVLRVGAVFASAFLRAIKFLEDHWKELCS
NIRSGQVSDWITEPSCRNAVSLILEKPNPDLADLVEHEFATKSWEGIIKKLWPITKYIEV
IVTGSMAQYIPTLEFYSGGLPLISTMYASSECYFGINFKPLSKPHDVAYTLLPNMAYFEF
LPVERNHEEVVLCNGVSDQNCVLKEDETEKLETVDLVDVKLGHYYELVVTTFTGLYRYRV
GDILMVTGFYNNAPQFRFVHRRNVVLSIDTDKTNEEDLLNAVTQAKLLLEPLGFLLIEYT
SYADTSSIPGHYVLFWELKVKGNNDLEELIDPSIMEQCCSTMEESLDSVYRRCRRKDHSI
GPLEIRIVKHGTFDALMDFAVSEGSSVNQYKTPRCINSEEAIKILDSRVVGRFFSKTTPF
WEPFRMETK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgattcccagttatgatccacatgacagtgaatatggtctgaagcttttggaggacctg
acaacaaatgcatatgaagtacagcaaaaggtgttagaagagatactagcaaagaatgct
caaacagattatcttaagagctttctcaatggtcactatgacaagaagcttttcaagcag
aaagttcctgttgtaaattatgaagatgtcaagccatatatcgagcgaattgccaatgga
gagccatcggagatcatttcagctcaaacaattactgagcttctcacaagctcgggaact
tcaggagggcagccaaagatgatgccttcaactgctgaagacttggagaggaagacattc
ttttataatctccttgtgcctgtgatgaacaagtatgtggatggcttggaccaaggaaaa
ggaatgtacctcttgtttatcaaaccagaaattagtactccttctggtttggtcgcgagg
ccagtcctaaccagttactacaagagcagtaacttcagaaaccggccttttaaccggttt
aacgtttacacaagccctgatgagaccatcttgtgctcagatagtaagcagagtatgtac
tgtcaattactctgtggattagtacagcgggaccaggtcctgagggttggtgctgttttt
gcttctgcttttctgagggctatcaaattcctagaggaccactggaaggagttgtgctca
aacataagatcaggtcaagtcagtgattggattactgaaccaagttgtagaaatgctgtg
tccttaatccttgagaaaccaaatccagatttggctgatttggttgagcatgagtttgct
accaagtcatgggaaggcattattaagaagctttggcctataacaaagtacattgaggtt
atagtcacagggtctatggcccaatatattccaacacttgagttctactctggagggctg
cctttgatttcaacaatgtatgcttcttctgaatgctattttgggatcaatttcaaaccg
ctaagcaagccacatgatgtggcttacaccctccttcctaatatggcctactttgagttc
ctacctgtggagagaaaccatgaagaggtagtcttgtgcaacggtgtttcggatcaaaat
tgcgtgctcaaggaagatgaaactgagaaactagaaacagttgacctggtggatgtgaag
cttggtcactactatgaacttgttgtcacaacttttacagggctatacaggtacagagtg
ggcgacattctaatggtgactggtttctacaacaatgctcctcagtttcgttttgtgcac
aggagaaatgtcgtgttaagcatcgatactgacaaaaccaacgaagaagaccttttgaat
gcagtgacacaagcaaagctactcctggaacccctcggcttcctcctgatcgagtacacc
agctacgctgacacttcttcgatccccggtcattatgtactgttttgggagctcaaagtg
aaaggaaacaatgacttagaagagctaatagaccctagtataatggagcaatgctgctcc
acaatggaagagtcacttgattctgtgtataggagatgcaggagaaaggaccactctatt
gggccattagagattagaattgtgaagcatggaacttttgatgcactcatggattttgct
gtgtctgagggatcttcagtgaaccagtacaagacaccaaggtgcattaactctgaggaa
gccattaagatattggattcaagggtggtgggaagatttttcagtaaaacaactcctttc
tgggagccatttagaatggagactaaataa
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