Rosa chinensis (China rose): 112196198
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Entry
112196198 CDS
T06020
Name
(RefSeq) disease resistance protein RPM1 isoform X1
KO
K13457
disease resistance protein RPM1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112196198
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WH_DRP
Rx_N
LRR_4
LRR_8
AAA_22
AAA_16
AAA_14
NPHP3_N
ATPase_2
RNA12
AAA_33
SRP54
DUF7376
Motif
Other DBs
NCBI-GeneID:
112196198
NCBI-ProteinID:
XP_024192273
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All DBs
Position
4:34347449..34351988
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AA seq
924 aa
AA seq
DB search
MASSVTDLLIGKIVAILENEGTTIASVRDEVDSIKEELRSMKAFLVDAEASTAKTEGEKL
RVESIRDLAYDVEDIIDEFMYHMYEKQSGSRFSRRLHKTICFPKCLWFRRKTAKRLQKIT
KKIKDIPGRNQRYGVGLVAGATTSEDIHKLVQNQAESSFFIMENELVGIEGKKQILMGWL
MDEEQHQTVISVVGMGGSGKTTLVAKTFNNERVKRHFDCYAWITVSQTYAVVDLFRSLIM
EFHKSRKEDFPANLNAMSRKELLELLVNYLESKKYLVVLDDVWDIKIWREIKVSLQERQL
GSRIIVTTRKEDVASNSFGVRSHVHHIQPLLKNEAWELFCKKSFSSNEHKTCPPDFASLA
CQLVEKCEGLPLAIVALGGLMSSKKLLDQWQQVCNSLNWHLDNNPLLDHVKHILLLSFND
LPSQLKHCFLYCSLFPEDFSIKRKRLIRLWIAEGFVENVKGITPEEVADGYLWELCFRSM
LQVVERNGTGRPKEVKMHDLMRDLALLTAEKEKFGLVYDGREVMEDISTRRLSIHKLEGE
FKSWPGMSKIRSLLGFATDMSSLTFSNTLVCQFKLLRTLDLEDVQIGKLPGAVVYLFNLR
YLNLKGTLIEELPKSIGRLRNLQFLNLWRTKIESLPPAIAKLLNLRHLIVYRFTGNHLDF
TENRLAFKLASGTRAPSNICKLQKLQCLSIIESEGDTGRLIGNMTQLRSIGISNVKERDE
IDLWVSIEKLNLLQSLILMASNEEEILPVKAQCPPLPHLQKLYLIGKLQNVIPWFSSLHS
LTTLLLHWSRLEEDLLLQIEALPNLTKLYLRNAYVGDELCFRRGFVKLERLELFNFASLK
NITIDEGVMPNLRYLWVDSCMQLKTVPLGLEYLSNLQTLGLENVPMEVIRPIRKGGVNRS
KVQHIPEIKHFFLRSSKRVYENLA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatctgtcacagacctcttaattggaaaaattgtggcaattcttgagaacgaa
ggaacaaccatagccagtgttcgtgatgaagttgatagcattaaggaggagcttcgaagc
atgaaagctttcttagtggatgcagaggccagcacagcaaaaactgaaggagagaaattg
cgggttgaaagcatcagagacttagcctatgatgttgaagatatcattgatgaattcatg
tatcacatgtatgagaagcaaagtgggagtcgattttcaaggaggctacacaaaaccatt
tgctttccaaaatgtctttggtttagacgtaaaactgcaaagaggttacagaaaatcact
aaaaagatcaaagacattccagggaggaatcaaaggtacggtgttggccttgtagcagga
gcaactacatctgaagatattcacaaattggtgcagaaccaagctgagtcttcgtttttc
attatggaaaacgaactggttgggattgaaggcaagaagcaaatactaatgggatggctc
atggatgaagagcaacaccaaactgttatatctgtggttggtatgggaggttctggaaag
acaactctagttgccaagaccttcaacaatgaaagggtgaagagacattttgattgttat
gcatggattaccgtttcccaaacgtatgctgtggtagacttgtttcgaagcttgatcatg
gaattccacaaatctaggaaggaagatttccctgcaaatttgaatgccatgagccgcaag
gaattgctagagttactagttaactacttggagtccaaaaaatacctggttgttctagat
gacgtgtgggatataaaaatttggagagaaataaaggtatcacttcaagagaggcaactc
ggaagtcgaattatagttacaactcgaaaagaagatgtagcatccaattcttttggagtt
agaagccatgttcaccatattcaacccctgctaaagaatgaggcttgggagctcttctgc
aaaaaatcattctcatctaatgagcacaaaacttgtccacctgattttgcgtcattagct
tgccaacttgtggagaagtgtgaaggccttcctctggctattgtggctttagggggtctt
atgtcttccaagaagttgctggatcaatggcagcaagtctgcaacagcttgaattggcat
ctagataacaatccattgctagaccatgtgaaacacatcttgttgctgagtttcaatgat
ttgccatctcaattgaaacattgcttcctctattgttctcttttcccagaagatttttca
attaagagaaaaaggcttattagattgtggatagccgaaggatttgttgaaaatgtgaaa
gggatcacgcccgaagaagttgcagatggctatctctgggaactctgcttccgtagcatg
ttacaagttgttgagagaaatggaacaggaaggccaaaagaagttaagatgcatgatctg
atgcgagatcttgctttgttgactgccgagaaggaaaagtttggtcttgtatacgacggg
agagaagtaatggaagacatctcaacccgtcgcttgtcaattcacaaattggaaggagaa
tttaaatcatggccgggtatgtcaaagattcgttctcttcttggctttgcaactgacatg
tcctcattgactttctcaaacacactggtttgtcaattcaaattgttgaggactctagac
ttggaggatgtccaaattggtaaactgccaggtgcagttgtttacttgttcaacttgaga
tacttaaatctgaagggcactttaatcgaggaacttccaaagtctatagggcgtctccgc
aaccttcaatttttgaacctgtggcgtactaagatagagtcacttccaccagcaattgca
aagttgctgaacctgcgccatctaattgtgtatcgcttcactggaaaccatctggacttc
actgaaaaccgtctggccttcaaacttgcgagtgggacaagagcgccatcaaatatttgt
aagttgcagaaattgcaatgtttatcaattattgaatcagaaggggacactggtagactt
atcggcaacatgactcaacttaggagcatcggcatatcgaatgtgaaagaaagagatgag
attgacctttgggtctcaattgaaaagttgaatctgcttcaaagtttgattttaatggca
agtaatgaagaggaaattcttccggtgaaagcacaatgtccccctcttccgcaccttcaa
aagctttatttgattggcaaactgcaaaacgtaataccttggttttcttcattgcatagc
ctcacaactctgcttttgcattggtctagacttgaagaggatttactacttcaaattgaa
gcactgcctaatctaacaaagctttatcttcgtaatgcatatgttggggacgagttgtgt
ttccgcagaggatttgtaaagctggagaggttggagttgttcaattttgcctcattgaaa
aatataactatagatgaaggggtgatgccaaatcttcggtacttatgggttgacagctgc
atgcagttgaagacagtgccattgggccttgaatacctttctaatttacaaactttgggt
ctggaaaatgttcccatggaagttataaggcctattcggaaaggaggtgtaaatcgctct
aaggtacaacacatccctgagatcaaacattttttcctacgatcatccaagagggtatat
gaaaacttggcctag
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