Rosa chinensis (China rose): 112196199
Help
Entry
112196199 CDS
T06020
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112196199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112196199
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
112196199
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
112196199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
HIRAN
FAN1_TPR
Mob1_phocein
YgjK_N
Motif
Other DBs
NCBI-GeneID:
112196199
NCBI-ProteinID:
XP_024192276
LinkDB
All DBs
Position
4:complement(34221428..34230554)
Genome browser
AA seq
902 aa
AA seq
DB search
MLKGRESLSRLVGKRRRFLPNRHSLLSAPTTTQSLLNLDIDPNGTLVSPEGSSNQDEQEN
TLAGSVACPVCSVKLSAQNNTINSHLDECLSRGTKRKLTQRTLLELNFCPVSKIQNFSCD
SKQFGNDLFPAARDESRNQVDSPSRDPINKDEISEVPDFDVTITQDDIYGVILETFIVGR
RFGDGTELYLGASIYLSRDPDNVKDPNAIKVVYSDSGCLKMLGFLPRKLAEYLSPLIDQY
SLNFEGCVTSIPKRSIDVVPIQIVCHKTSDNKDFNDDKVFKCLWRNAQQVIESTKSCPPS
AIKYQDNFCVFIREVLRNSSHLLTDDEKNFIESFTSMSDDSQRLFVRLYTRKGPWFRLSA
ISYPEVLDPQQAVKELSETGYASCFEIINKLSDDCIKEILDLLTVSELREILCILKQGCN
RGLRKQDLIASLISSYDEDLCPLLPSMVLHRTGSCVRISSNAESLIWRAERLFFLNGEQD
LSAFLLVDLGIVKYPTYKCIVSQQIFSARDDLLGYEEAIEVAQIVDEALDGSNTGLVLKC
IKIADSHLSNPVQSLTSESMAPFLSHFSATFVNSKVVLLGISFLEREHRYNDAIYLLKRL
LNCFARDGRRGYWTLRLSIDLEHMGYLNESLLVAENGLLDEWVRAGSRVALQRRVLRLGK
PPRRWKTPSFAESVKRKIMEVNVPGRPLNCAIGTKSRFYGEDGEQCGVEQLALQYYAEEG
GWQGVHTESGIWLTIFGLLMWDIIFSNVPNVFRTRFQTAPLDLETDSFYLVRKNHIESHL
QKILDGMAEEILITSWELHEGTACRGVNWGRHSLSELRAAVTCIGGPCVAAFCRHLAQDY
RSWSSGMPDLLLWRFHGKYRGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVSP
IV
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagggaagagaaagcttgagccgattggtgggcaaacgcaggcgcttccttccc
aatcgtcattcactcctctccgcccctaccaccacccagagcttattgaatctggatatc
gatccaaatggcacactcgtgtccccggaaggctcttcaaatcaagacgaacaagaaaac
acactggcgggctctgttgcttgccctgtttgcagcgtcaaactcagcgcccaaaacaac
accatcaattctcatctggatgagtgtctatctagaggaaccaaacgaaagctaacccag
cgcacacttctagagctcaacttctgcccagtgtcgaagattcaaaatttttcctgtgac
tctaaacagtttggaaatgatttgtttcctgcagctcgggatgaaagtcgaaatcaggtt
gacagtccatccagagacccaatcaataaggacgagatcagtgaggtgccagattttgat
gtgaccatcactcaggacgacatatatggggtgattcttgaaacttttattgttggccgc
aggtttggtgatggaactgagttatatcttggtgcaagcatttatctctcaagagatcct
gataatgttaaggatcctaatgctatcaaggttgtttattcagattcgggatgccttaaa
atgcttggctttctccctcgcaagctagctgagtatttgtctcctctgatagaccagtat
agtctaaattttgagggatgcgttacctctattcccaagcgttctattgatgttgtccca
atacagatagtgtgtcacaagaccagtgataataaggactttaatgatgacaaggttttc
aaatgtttatggagaaatgctcagcaagtaattgaatctacaaagtcctgtccgcccagt
gcaataaaatatcaggataacttttgtgttttcatacgtgaggttttgagaaacagttct
cacctcttgacagatgatgaaaagaatttcatcgagtcatttacttcgatgtcagatgat
agtcagaggctatttgttcggctttatacacggaaaggcccatggtttcggctgtctgct
atttcatacccagaagtactggatccccaacaagcagtgaaagagctatctgagacaggg
tatgcatcttgctttgaaattataaataaactatctgatgattgtattaaggagattttg
gatttgctcactgtatctgagctacgtgaaatcttgtgcatccttaagcagggttgcaat
cgtggcctaagaaagcaggatctcattgcatctcttatatcttcttacgatgaagatttg
tgcccattactacctagtatggttttgcacagaacaggatcctgtgttaggatatcttca
aatgcggagtcccttatctggcgtgctgagaggcttttcttcctgaatggtgaacaggat
ctctcggcatttctactggtggatttgggaatagtcaagtatccaacttacaagtgcata
gtctcacaacaaattttctctgctcgagatgatttgcttggttatgaagaggctattgaa
gtggcacaaatagttgatgaagctcttgatggaagcaacactggattggtcttaaagtgc
ataaagatagctgattcccatttatccaatccggttcaatccttgacctctgaatcaatg
gctccattcctttcccacttttcagctacatttgtcaactcaaaagtggttttactagga
atttcttttcttgagcgtgagcataggtacaatgatgctatctatttactgaaaaggctg
ctgaattgtttcgctcgtgatggtagaagaggatactggacactacggttatcaattgat
ttggagcacatgggctatctgaatgagagccttttggttgctgaaaatgggttactagat
gaatgggtgcgtgctggttcaagagtggcacttcaaaggagagtccttcgcttgggaaaa
ccaccgaggcgatggaaaactcctagttttgcagagtctgtcaagaggaagatcatggag
gtaaatgttccggggagacctttaaattgtgcaattggcacaaagagcaggttttatgga
gaagatggggagcaatgcggtgtagagcagctagctctgcaatattatgccgaggaaggt
ggatggcagggtgttcatacagagagtggcatttggttgactatttttggacttcttatg
tgggatattatattttccaatgtaccaaatgtcttccgcaccagatttcagactgctccc
ttggatttagagactgatagcttttatctagtgagaaagaaccatatcgagtctcaccta
cagaaaattcttgatggcatggctgaagagattctcatcacttcatgggagttacatgag
ggaacagcatgtcgaggagttaactgggggcgacattccctctctgagcttcgggcagct
gttacatgcatcggtggcccatgtgtggctgcattttgtcgacatcttgcacaagattat
cgtagttggtcaagtggaatgccagatttacttctgtggcgcttccatgggaaatacaga
ggtgaagcgaagcttgttgaagttaaaggccccagggatagactctctgaacagcagcga
gcatggctattgcttttaatggattgtgggttcaatgctgaggtctgtaaagtgagccct
attgtctga
DBGET
integrated database retrieval system
