Rosa chinensis (China rose): 112196273
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Entry
112196273 CDS
T06020
Name
(RefSeq) amino acid transporter AVT1I
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112196273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112196273
Transporters [BR:
rcn02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
112196273
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
112196273
NCBI-ProteinID:
XP_024192353
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All DBs
Position
4:complement(62150904..62152467)
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AA seq
412 aa
AA seq
DB search
MELDSLKVEKIESQIQPLEPNKGTTFFRTCFNGLNTLSGVGILSVPFALSQGGWLSLVLL
FSVAILCWYTGLLLQRCMDSNSRIKTYPDIGQAAFGRKGRVAISIFMYLELYLVAVEFLI
LEGDNLNQLFPNVSFNMGGHTIGGKQCFVLATALVILPTTWLKSLGLLAYISAGGVLASI
ILVACVFWVGAVDSVGFHERGDLLNWKGLPTAISLYLFCYCGHAVFPTLCNSMKDRSQFP
KVLLVCFITSTITYGSMAVLGYLMFGEYLKSQVTLNLPVQKISAKVAIFITIVNPLTKYA
IIITPIATAIEDSRHFCNSHAIISIMVRTGIVISTVCVALMVPFFGYVMAFVGAFLSVTV
SILLPCLFYLKINNVALRFGFELMTIVGIMVMGSFVGVVGTYTSLKEIVNHL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagttggactccctcaaagtagagaagatagagagccaaattcaaccacttgaacca
aacaaaggcaccacctttttcagaacctgtttcaatggactcaacacactgtcaggtgtg
ggaatactatcagttccatttgctctatctcagggagggtggttgagcttagtgcttctc
ttctcggtagcaatcctatgttggtatacagggctgcttctacagcgatgtatggactca
aattcgcgcataaaaacttatcccgacattggtcaagctgcttttggacgcaaaggaaga
gtggccatatccatctttatgtatcttgagctgtatttagttgcagttgaatttctaata
ctagaaggtgataacttaaaccagttgttcccaaacgtgagttttaacatgggaggccac
acaattggaggtaagcaatgctttgttttagccactgcccttgtaattctgccaactaca
tggttgaagagcttgggattgctggcatatatttcagctggaggggttttggcttcgatt
attttggttgcttgtgttttttgggttggtgctgttgatagtgtgggatttcatgaaaga
ggtgatctcctgaattggaaaggattgcctactgctataagcttgtatttgttctgttac
tgtggtcatgcagtttttcccacattatgcaattccatgaaagatagaagccaattcccc
aaggtattgcttgtttgcttcataacaagcaccatcacctatggatccatggccgttttg
ggttacttgatgtttggagaatatttgaagtcccaagtgacattaaatcttcctgtacaa
aaaattagtgctaaagtagcaattttcatcacaatagttaaccccctgactaagtatgca
attataatcactccaattgctactgctatagaggactcacgccatttttgcaacagtcat
gctattatcagcatcatggtgaggacggggattgtgatcagcaccgtatgtgtggcattg
atggttccatttttcggctatgtcatggcattcgtcggtgcttttctgagtgttactgtc
tcaatattgttgccgtgcctgttctacctgaagattaacaatgttgctctcaggtttggg
ttcgagttgatgacaattgttgggattatggtgatgggatcttttgttggcgtagtaggc
acttacacttctctgaaagaaattgtaaaccatctctaa
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