Rosa chinensis (China rose): 112196412
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Entry
112196412 CDS
T06020
Name
(RefSeq) replication protein A 32 kDa subunit B
KO
K10739
replication factor A2
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03030
DNA replication
rcn03420
Nucleotide excision repair
rcn03430
Mismatch repair
rcn03440
Homologous recombination
rcn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112196412
03420 Nucleotide excision repair
112196412
03430 Mismatch repair
112196412
03440 Homologous recombination
112196412
03460 Fanconi anemia pathway
112196412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcn03032
]
112196412
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112196412
DNA replication proteins [BR:
rcn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
112196412
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
112196412
MMR (mismatch excision repair)
112196412
DSBR (double strand breaks repair)
HR (homologous recombination)
112196412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
RPA_C
RMI2
tRNA_anti_2
Motif
Other DBs
NCBI-GeneID:
112196412
NCBI-ProteinID:
XP_024192531
LinkDB
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Position
4:complement(20795129..20801013)
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AA seq
266 aa
AA seq
DB search
MNVSQFDGSAAFHGGGFMPPAANPTPEHSFFASKNRDVQTLLPVTLKQISDAIAGENGKS
DFSVDGVDVSTVKLVGAVQEFVGRCTDATFTLDDGTGRVECNRWCQEQIDTAEIEGISNG
MYVRVHGRLKTFQGKKTIQVFSVRPVDDYNEIASHYIECMYVHFFNSKLLKPQVGVGVTT
QPYMTIPPNQVSGQHSLYGQRSIEERVLQVLNQPLYLSRDAGAKAEDIAQQLKVPVKDVI
HAASNLAHVGSIYEIDTLHYKSLANG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgagccaattcgacggaagcgccgccttccacggcggtgggttcatgcccccc
gccgccaacccaacccccgaacactctttctttgcttccaagaatcgtgacgtccagaca
ctgcttccagtaacccttaagcagatcagcgacgccattgccggcgaaaatggtaaaagc
gatttctctgttgacggcgtcgatgtgtccactgttaagcttgtgggagcagtgcaggag
tttgttggaagatgtacagatgctactttcactcttgatgacgggaccggccgggttgaa
tgcaaccgatggtgtcaggagcaaatagacactgccgaaatcgaaggaatctcgaacgga
atgtacgttcgggttcatgggcgcttgaaaacctttcaggggaagaagaccatacaagtg
ttctctgttaggcctgtggatgactataatgagattgcaagccactatatcgagtgtatg
tacgtacatttcttcaacagcaagttactgaaaccacaggttggtgtaggtgtcacaact
cagccatatatgacaattccaccaaatcaggtatctggacaacatagcctctatggacag
aggagcattgaagaaagggtcttacaagttttgaaccagcctttatacctttcaagggat
gcgggagcaaaagctgaggatattgcccaacaactgaaagtaccagtgaaagatgtcata
catgctgctagtaatcttgctcatgtaggcagtatttacgagatcgatacgttgcactat
aaatctcttgccaatggttga
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