Rosa chinensis (China rose): 112196449
Help
Entry
112196449 CDS
T06020
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112196449
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112196449
04147 Exosome [BR:
rcn04147
]
112196449
04090 CD molecules [BR:
rcn04090
]
112196449
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112196449
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112196449
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112196449
CD molecules [BR:
rcn04090
]
Proteins
112196449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_29
AAA_22
AAA_21
AAA_15
AAA_16
nSTAND1
TMEM70
Motif
Other DBs
NCBI-GeneID:
112196449
NCBI-ProteinID:
XP_024192563
LinkDB
All DBs
Position
4:56660817..56666733
Genome browser
AA seq
1310 aa
AA seq
DB search
MGKKGGLFRYADKVDKLLMVFGTLGSIGDGLMTPLTMFVLSRVINEYGAATLTFSNDIVD
EYSLKLLSVAIGVGISAFIEGFCWTRTAERQTSRMRMEYLKSVLRQDVAFFDSQANSSMT
FQVISTISSDAHFIQDTIAEKLPNCLAHLSSFLFCFPVAFVLSWRLALAALPFSVMFIIP
GLGFGKVMQDLGVKINGAYEVAGGVAEQAISSIRTVYSYVGERQTLKKFSIALEKVTQLG
IKQGFTKGLLIGSMGMIYAAWAFQAWVGSKLVIDRGEKGGLVFVSGICVILGGLAIMNAL
PNLSFITQASTAATRISEMIDRVPVIDSEDERGKVLPYVKGDIEFRKVDFFYPSRPDTPI
LQGLNLKVQAGKMLGLVGSSGSGKSTIISLLERFYDPVKGEILLDGHKLKKFQLHWLRSQ
MGLVNQEPILFATSIIENILFGKEGASMEDVTSAAKAANAHDFIVKLPAGYHTQVGQFGV
QLSGGQKQRISIARAIIRDPKILLLDEATSALDAQSETIVQEALDQASQGRTTIVIAHHL
STIRKANTIVVLQSGRVVEKGSHDELVNMRNGEAGAYKKMLQLQKEAMENSNPNRMEQPQ
TPQTPRGLGSSWQNSPGPLSGRSSWHTTKSVHSSWQNSPLTPAYAVTPIFSISIANSIQT
PQYDDFDDEWSKEISKTSSSQWRLFQMNAPEWKQAILGCLGAASFGTLQPIHAYCLGTVV
SIYYGSDDSTIRSQTRFYCYIFLGLAVFSFFANLLQHYNFAVMGEKLSERVRTKLLEKIL
TFEIGWFDQDENTSAAICARLTTEANIVRSLTADRISLLVQVFFSATIAYILGLMVTWRI
AIVMIAIQPLLIGSFYSRSVLMKSMSRKAQKAQAVGSQLASEATFNHRTITAFSSQTRIL
NLFRDAMQGPRNENIKQSWVAGFGLFSSQFLTTAAIALTYWYGGRLMNQNLLSSTHLFQV
FFILMSTGKNIADAGSMTSDLARSGKAITSIFAILDRESEISSEELKGAKKTFKGHIELK
NVVFSYPVRPDQMIFKGLNLKIKAGNTMALVGQSGSGKSTIIGLIERFYDPLNGSVFIDG
CDIKQYDLKNLRSQIALVSQEPTLFGGTIQENIVYGKENATVAEVRKAAKQANAHEFISS
MENGYDTYCGERGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEK
MMVGRTCVVVAHRLSTIQKADSIAVIMNGKVAEQGSHSELVSIGSSGAYYSLIKLQSNQI
WVRRNSLEVNLSEVNPLKADLGEVKSPQWGEVKPLKEHLGEAKSLQGESG
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaaggcgggttgttcaggtatgcagataaagttgacaagttactgatggtg
tttggaactttgggtagcattggagatgggttgatgacaccgcttacaatgtttgtgctc
agccgcgtcatcaatgagtatggagctgcaactcttactttctctaacgacattgtcgac
gagtactcactcaagctgctcagtgtagcaattggagttggaatatctgctttcattgaa
gggttttgttggactagaactgctgagagacagacatccagaatgagaatggaatactta
aaatcagtcctcaggcaagacgttgcgttcttcgacagtcaagcaaattcttccatgacc
ttccaagtcatttccacaatctcttctgatgctcattttatccaagacacaatagctgag
aagctaccaaattgcctggctcacctctcatcatttctgttctgctttcctgttgccttt
gtgctgtcttggagattggcactggctgctcttccattctcggtcatgtttatcatcccc
ggattgggatttgggaaagtaatgcaagacttgggagttaagataaatggtgcctatgaa
gttgctggaggggtagcagaacaagcaatctcttcaatccgcacggtctattcttatgtt
ggggagcgtcaaacactgaagaagttcagcattgctcttgagaaagttacacagcttggc
ataaagcaaggattcacaaagggattactaatagggagcatgggaatgatctatgctgct
tgggcttttcaggcttgggttggaagcaaacttgttattgatagaggtgaaaagggtggc
ctcgtttttgtttctggaatctgtgtaattctgggaggattggccattatgaatgcactt
ccaaatctctccttcatcactcaggcaagtactgctgctacccgaatatctgagatgatt
gatcgcgttccggttattgactctgaagatgaaaggggaaaagttttaccatatgtgaaa
ggagatattgaattcagaaaggttgacttcttctacccgtcaagacctgataccccaatt
cttcaaggactcaaccttaaggttcaagctggtaagatgctgggtcttgttggaagcagt
ggctctggaaagtcaacaatcatttctttgcttgaaagattttatgatccagtaaaaggg
gaaattctccttgatggacacaaattaaagaagtttcagctgcactggttaagatcccag
atggggctggttaatcaagaaccgattctctttgcaacatccataatagagaatatttta
tttgggaaggaaggagcttctatggaagacgtgacaagtgcagctaaggctgcaaatgca
catgacttcattgttaaactacctgcaggatatcacactcaagttgggcaatttggagtt
caattgtctggagggcaaaagcaaaggatttccatagcaagagcaataatcagagacccg
aaaattcttttgcttgatgaagcaacaagtgctttggatgctcagtctgaaactattgta
caggaagccttagaccaagcatcgcaaggaagaacaaccattgtcatagctcaccacctc
agcacaatacgtaaggctaatacaatagtggttcttcaatcagggagagtggttgagaag
ggatcccatgacgagttggtcaacatgagaaatggagaagctggagcttacaaaaaaatg
ctgcaattacagaaagaagccatggaaaatagtaaccccaacagaatggagcaacctcaa
actccacagacaccaaggggtttggggtcaagctggcaaaatagcccaggaccactaagt
gggagatcaagctggcacacaacaaagagtgttcactcaagctggcaaaacagcccactg
accccagcatatgcagtcaccccaatattttccattagtatagcgaactccatccaaact
ccccagtatgatgactttgacgatgaatggtcaaaagaaatctctaaaacctcctcatct
cagtggcgtttgtttcaaatgaatgcaccagagtggaagcaagcaatactggggtgtcta
ggtgctgctagctttggaactcttcagccaattcatgcctactgcttaggaacagttgtg
tcaatttactatggatcagacgattccaccatcagatcacagaccagattctactgctac
atcttcttaggcttagcagttttcagcttctttgctaatctcctccagcattacaacttt
gcagtcatgggagagaaattatctgaaagagttcgaacaaaattgctagaaaagattctt
acctttgagatagggtggtttgatcaagatgagaacacaagtgctgccatctgtgcccgg
ctaaccactgaagccaacattgttagatcccttactgcagaccgtatctcattgttggtt
caggttttcttcagtgccaccatagcttatatactcggattaatggtcacatggaggata
gccattgtcatgattgcaatacaacctttgctcattggaagcttctattctaggagtgtt
ttaatgaagagtatgtctagaaaagcacagaaagcacaggctgtaggtagtcaacttgca
agtgaagctactttcaaccacaggacaatcactgcattttcctcacagacaaggatatta
aacctctttcgagatgctatgcaaggcccgaggaacgagaacatcaaacagtcatgggtt
gcgggttttggtctgttcagctctcaatttttgaccacagctgctatagctttgacatat
tggtatggagggaggcttatgaatcagaacttactatcatcaacgcacctatttcaagtt
ttcttcatcctaatgagcactggtaagaacatcgcagatgcaggaagcatgacttctgat
cttgcaagaagtgggaaagccatcacctcaatatttgctattctagacagagaaagtgag
atttcttctgaggagcttaaaggggctaaaaagactttcaagggtcacatagagctgaaa
aatgtggtattctcatacccagttaggcctgaccagatgatatttaaaggcttgaatctc
aagattaaagctggaaacacaatggcactagtgggacagagtggttcagggaaatccact
atcattggcttgattgaaagattttacgatccactaaatggatccgtattcatagatgga
tgtgacatcaagcagtatgacttgaagaacttgaggtcacagattgctttggtaagccaa
gagcctactctatttggaggcacaatccaagaaaacattgtatatggtaaagaaaatgca
acagtggctgaagtaaggaaggctgcaaaacaagccaatgctcatgagttcataagctcc
atggaaaatggatatgacacttattgtggagaaagaggagttcagctatcaggtggccag
aagcagagaatagcacttgcccgagccatactaaagaacccaagtatccttcttttggat
gaagcaaccagtgcccttgatagcgtgtcagagaatctagtccaagaagcactggagaag
atgatggttggcagaacatgtgtagtggtagctcacaggttgtccacaatacaaaaagca
gactccatagcggtgataatgaatgggaaagtagcagaacaaggatcacactctgaactg
gtttcaattggaagtagtggtgcctactactctttgataaaactacaaagcaatcaaatt
tgggtgaggcggaattctcttgaggtgaatctgagtgaggtgaatcctctcaaagcggat
ttaggtgaggtgaaatctcctcaatggggtgaagtgaaacctctcaaagagcacttgggt
gaggcaaaatctcttcaaggtgaatctgggtga
DBGET
integrated database retrieval system
