Rosa chinensis (China rose): 112196705
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Entry
112196705 CDS
T06020
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112196705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112196705
03036 Chromosome and associated proteins [BR:
rcn03036
]
112196705
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112196705
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112196705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
Nucleoporin_N
TAF1_subA
Motif
Other DBs
NCBI-GeneID:
112196705
NCBI-ProteinID:
XP_024192888
LinkDB
All DBs
Position
4:complement(20711711..20727704)
Genome browser
AA seq
1490 aa
AA seq
DB search
MELDPESVGMEVPILGSDSVEWIEVPILSSNELAATADADTCAPLTHDCASSIAIGDPPT
YLIWIIHKDFPRTLELLELSAKKEFPKVGLRINFPEALSSSVFLCKNEIDIGSRSHPYLL
YALTVAGVAYLLKLGTTSSYAPSSVIREFNLHPYGPISSAAATPTGCLVVGQNDGSLACF
QLTLESTAPGFLQELRDDSGTGSFWGFMSRGRTVGAVQDLVISMVHGKPLIFVIHTDWVL
RVWDLSFHGRLFANKMNGPTVAGAASVRLWVGQADNDSSIIPVAILYRHNSDISSETIYV
YRLHCNVRDRIELLIYRSKQIIPIEDGWIDVKLISNKICILKNHGLVFLKLLHINAETVD
AVWVDAVCYPLQEDFVADQLFQSSKHSSDDLLLITHSIFSSSRDHILPVVSSIFLRRLLL
PGIHHNAALRATLLDYNRHWTESDFHSLTADGLKKEILSLIEHEALTGNSSSIFCCWEIF
CARYFQNWCKSNAPCGLLVDSSTGTVGLIRKSSVSFFRSLEDIERVNDGSLDELGNIPSF
GLDSFGKADCKLLAEMLRCVTNVSQQLGKTASAIFYELLISAPPVISSKEIIPRLLKILE
TGYSSTAAALWIADLGTDLAWEKNPADHKNLRKFSFDMMKSLHALHEKSGTWSRILSVIE
KYLKYLIPRKIIQKFDAEVALDINASILVPATFQVAKVMFESALDIHLFLSYLVSISRQI
NMLHDDISKIQRELVPMIQEVIYEWLLLHFFATTPSESVAFEDFSSQLSLLQIDSNTGRR
LCNEKLGKCEFTLAFIFLLNVRSSSKDQNHFSPRSIPSVEDIIDSVREFDSWTMWGQDGE
SLTVLKRVVDLALILLRHGQYDAVEHLLTIVEAHLEKEETSHGIRATDGGWCILHHLLGC
CFLAQAHRGVHGVLKERKVHEAVRCFFRAASGSGSAHALQSLPQEAWLPHLGIDGSVSDA
AWRLHYYQWAMQICEHYNISEGACQFALAALEQVEEAYSANNDSHDRAPFNESVSTIKGR
LWANVCQFTLDLNLYYDAYCAIISNPDEESKYISLRHLINVLYERGAIKILCGGQLPFIG
LTEKVEQELAWKAERSDILAKTNLYKLLYAFEMHRHNWRKAASYMYLYSARLRTEASLKG
YQQLWRVLKEILNGLSAAINALHLVHPAYAWIDPLLVRSALHNEQYPGREIRITIEDQPA
NNDVHPRSWKSFMDIQKIENEFVLTSAEHLLSLAHVKWTNTGTQTAPLELADLLIQTNLY
DMAFTVLVRFFKGSELKRGLERVFSAMSLKCFPHIVDSSRVGDDPIVHGSPDMSSANQQS
NGINQWGTLELYLDRYIVFHARLPLIVAETLLRTDSQIQLPLWLVKLFKDGRREKTLGMT
GHESNPASLFQLYVDYGRHGEAINLLLEHEGCFGSMRPANIMNRKRPFGVWFPYTMIQRL
WCQLEEMINSGHMVAQCKQFKDLLHRALLKHLQLVKMDSEGLCFISENKM
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatccggaatcggtaggcatggaagtaccaatcctcggcagcgattcagtg
gaatggatcgaggtccctattctttcatctaatgaattggctgccaccgccgatgctgat
acttgtgcccctctcactcacgattgcgcttcttccatcgccattggagaccctcctaca
tatctcatatggataatccacaaggatttcccccgtactctcgaattactcgagctctct
gctaagaaagaatttccaaaagtcggactgcgaatcaattttccagaagcactctcttct
tcagtttttctttgcaaaaatgagattgatatcggttccaggagccacccctatttgcta
tatgcattgaccgtggccggagtcgcttaccttttgaaacttgggaccacctctagctat
gcacccagctctgttattagagagtttaacttgcatccctacggacctattagcagtgcc
gcagcaacgccgaccggatgtctcgttgtaggtcagaatgacggttctcttgcttgcttt
caactcacacttgaatccactgcccctggttttctgcaagagctacgggatgattcagga
actggtagtttctggggtttcatgtcaaggggtaggacggtaggggctgtgcaggacttg
gttatatctatggttcatgggaaaccacttatatttgtgattcatacggattgggtgtta
agagtatgggatctttcatttcatggcaggctctttgccaataagatgaacggtccaaca
gtggcaggagctgcatcggtaaggttgtgggttggtcaagctgacaatgactcgagcata
attcctgtggcaatcttgtacaggcataattcggatattagctcagagacaatctacgta
tataggctccattgtaacgtgagagacagaattgaattattgatatatcgttcaaaacaa
ataattcctattgaggatggatggattgatgtcaaacttatttccaacaagatatgcata
ttgaaaaatcacggactggtgtttctcaagttgttgcatataaatgccgagacggtagat
gcagtttgggtagatgcagtttgttatcctttgcaagaggactttgttgcagatcaactc
tttcaaagttcaaagcattcttcggatgaccttcttttgataactcattcaatattttca
tcttcaagggatcatattctacctgttgtatcttccattttcttacgtaggctgcttctt
cctggcattcatcataatgctgctttgcgcgcaactttgttggattataataggcactgg
actgagtcagatttccactccttaactgctgatgggttgaagaaggaaattctttccctg
attgaacatgaggctctgactggtaattcatcgtcaatattttgctgctgggaaattttt
tgtgctcgctatttccaaaactggtgcaagagcaatgcaccatgtggcctgcttgttgat
tcctcaaccggcactgttggtttaattagaaagagttcagtatctttttttcgttctttg
gaggatattgagcgggttaatgatggctctttggatgaacttggcaatattccaagcttt
gggttggattcatttggcaaggctgattgtaagctactagctgaaatgctcaggtgtgtc
actaatgtcagccagcaattgggaaaaacagcttctgctatattttacgaattactcatt
agtgcaccaccagttatctcatctaaagaaattattccacgcctattgaagatattagaa
actggatatagttcaacagcagcggcgctttggatagcagatcttggaactgatcttgcc
tgggagaaaaatccagcagatcacaaaaatttgaggaaattttcttttgacatgatgaag
tctcttcatgctttgcacgagaaatctggcacatggagccgtattttaagtgtgattgag
aagtatcttaagtatctcatacctcgaaaaattatacaaaaatttgatgctgaagtagca
ttggatattaatgcctccatcttggtcccagctacgtttcaagttgcaaaggttatgttt
gagtctgcattggatattcatctgtttctaagctatctagtgagcattagcaggcagatc
aatatgctacatgatgatatatccaaaatacaacgtgagttggtgccaatgattcaagaa
gtcatttatgagtggcttctcctgcatttctttgccaccacaccatctgaatcagttgca
tttgaagatttcagctctcaactttcattgttacaaattgatagcaacactggtagaaga
ttatgtaatgagaagcttgggaagtgcgagttcactctggcttttatattcttacttaat
gttagaagttcctccaaagaccagaaccacttttctccaagaagcataccaagcgttgag
gacataattgattcagtacgagagtttgatagctggaccatgtggggccaggatggggaa
tcccttactgtcctgaagcgtgtagtggatcttgcattgatcctgctaaggcatgggcag
tatgatgctgttgagcacttactcactattgtggaggcacatttagaaaaggaggagact
tctcacggtattagagctacagatggtggatggtgcatacttcaccatcttttaggatgc
tgcttccttgctcaggcacatcgtggagtacatggggttctgaaagagaggaaagttcat
gaagctgttcgttgtttcttcagagccgcatctggaagcgggtcagctcatgctttacaa
agcttgcctcaggaagcgtggttgccacatcttggtatcgatggtagcgtatcagatgct
gcatggaggctccattactatcagtgggcaatgcagatatgtgagcattataatattagt
gaaggtgcatgtcagtttgctcttgctgcgcttgagcaagttgaggaagcttacagtgca
aacaatgattcccatgacagagctccatttaatgaatcagtatccaccatcaaaggaagg
ctttgggcaaatgtttgccaatttactttagatctcaatctctattatgatgcatattgt
gcaataatttcaaatccagatgaggagagcaagtacatcagcttgaggcatcttataaat
gttctttatgaacgtggtgccataaagattctatgtggtggtcagctaccattcattggt
cttacagagaaggtagaacaagagcttgcatggaaggcagagcggtcagacattttagca
aagacaaacttatataagttgctttatgcatttgaaatgcatcggcataactggcgaaaa
gcagcaagctacatgtacctttattctgcccgtttgagaactgaagcatctctgaaaggt
taccaacaattgtggcgagtactgaaggagatactgaatgggctctctgcggctatcaac
gcacttcatcttgttcatccagcatatgcttggattgatcctctgcttgtgagaagtgct
cttcacaacgagcagtatccaggtagagagattagaataacaattgaagaccagccagca
aacaatgatgttcatcctcgaagttggaaatcttttatggatattcagaaaattgagaat
gagtttgtgcttacttcagcagaacatctgctttcactggcacatgtcaaatggacaaat
acaggaacccagacagcaccattagagttggctgatcttttgatccagacaaatctatat
gatatggcatttacagttcttgtaagattcttcaaaggttcagagttaaagaggggattg
gaaagagttttctcagctatgtcactaaaatgctttccacatatagttgattcttcaagg
gttggggatgatcccatcgttcatggttcaccagatatgtcttcagcaaatcaacaatcc
aatggaataaatcaatggggaactctcgagctttatcttgaccggtatatagtgttccat
gcacgtctaccactaattgttgccgaaactcttcttcgtacggattctcaaatccaactg
cctctttggttggttaaattattcaaggatggcaggagggaaaagacattggggatgact
ggccacgaatcaaatccggcatcgttgtttcaattatatgttgattatggtcgacatgga
gaagctataaatctgttgcttgagcacgaagggtgttttggatccatgagaccagccaac
atcatgaatcgtaaaagaccatttggagtttggtttccgtatacaatgattcagcgcctc
tggtgccaacttgaggaaatgataaattccggtcacatggtagctcaatgtaagcagttc
aaagatttgctacacagagctttgctgaaacatctccaactggtaaagatggactcggaa
ggactttgttttatttcagaaaataagatgtaa
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integrated database retrieval system
