Rosa chinensis (China rose): 112196709
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Entry
112196709 CDS
T06020
Name
(RefSeq) clustered mitochondria protein
KO
K03255
protein TIF31
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rcn03012
]
112196709
Translation factors [BR:
rcn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112196709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
TPR_NPHP3
CLU_N
GSKIP_dom
TPR_2
TPR_MalT
TPR_1
TPR_8
TPR_9
TPR_7
HTH_6
ASL_C
Motif
Other DBs
NCBI-GeneID:
112196709
NCBI-ProteinID:
XP_024192893
LinkDB
All DBs
Position
4:34393886..34407346
Genome browser
AA seq
1428 aa
AA seq
DB search
MAGKSNKGRNRRGSHNAASSSDSAVQSDAPVKDNSKDESSASESVKANANGVPTVQESTS
DKLEVKDSETNVAVVEPKQGESETENSAGQPKQGDLHLYPVSVKTQGGEKLELQLNPGDS
VMDIRQFLLDAPETCFFTCYDLLLHTKDGSTYHLEDFNEISEVADITIGGCSLEMVPALY
DDRSIRAHVHRTRELLSLSTLHASLSTSLALQYETAQNKVATPGDTIKTEVPELDGLGFM
EDVAGALSNLLSSPSNEIKCVESIVFSSFNPPPSYRRLVGDLIYLDVVTLEGNKLCITGT
TKMFYVNSSSVNNTLNPRPSKSYPEATTLVGILQKISSKFQKAFREILERRASAHPFENV
QSLLPPNSWLGLHPVPDHKRDAARAEDALTLSYGSELIGMQRDWNEELQSCREFPHTTPQ
ERILRDRALYKVTSDFVDAAISGAVGVISRCIPPINPTDPECFHMYVHNNIFFSFAVDAD
LEQLSKNHMSVSNSKMGSTGSLGSSSEKSTGSLLHRESEIPNGEKCDASCAGECHDAMES
AAETQLGETEQATYASANNDLKGTKAYQEADVPGLYNLAMAIIDYRGHRVVAQSVLPGIL
QGDKSDSLLYGSVDNGKKICWNEDFHSKVVEAAKRLHLKEHTVLDGSGNVFKLAAPVECK
GIVGSDDRHYLLDLMRVTPRDANFTGSGSRFCILRPELITSYCQVLDAEKSKSKSKCEGE
AQVTADGPNDNQDIAEKEKTIDAQEIVSPPAESSESREETLFNPNVFTEFKLAGNAEEIA
TDEENVRKASLYLTEVVLPKFIQDLCTLEVSPMDGQTLTEALHAHGINVRYIGKVADGTR
HLPHLWDLCSNEIVVRSAKHILKDVLRDTEDHDIGPAICHFFNCFFGSYQAVGSKVAANS
SQSRTPKKEQAGHQSPGKRSKGQGRWKAGASTRKSVSSYMHVSSETLWSDIQEFAKLKYE
FELPKDARMHVKKDSVIRNLCQKVGITIAARRYDLKSAAPFEISDILNLQPVVKHSVPVC
SEAKDLVETGKIQLAEGMLSEAYTLFSEAFSILQQVTGPMHREVANCCRYLAMVLYHAGD
MAGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALRHMSRALLLLSLS
SGPDHPDVAATFINVAMMYQDLGKMDTALRYLQEALKKNERLLGEEHIQTAVCYHALAIA
FNCMGAFKLSHQHEKKTYDILVKQLGEEDSRTRDSQNWMKTFKLREQQMNAQKQKGQALN
AASAQKAIDMLKANPDLMQAFQSAAIAGGSGSSNTSVNKSLNAAAIMGETLPRGRGVDER
AARATAEIRKKAAARGLLIRQHGVPVQALPPLTHLLNIMSAAGGAPDSVENGETTAAKEG
NNHPSNGPADAKTNQPSLEPEGQPPVGLGRGLAALDGKKQKSKAKAAS
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaatcgaacaaagggaggaaccggagaggatcacataatgctgcaagttcg
tctgattcggcggtccagtctgatgctcctgtgaaagacaactcaaaagatgagtcgagt
gcttcagagtctgtcaaggccaatgctaatggtgttccaactgtgcaagagtcaactagt
gacaagctggaggtaaaggattctgaaactaatgttgcagtcgtcgaaccaaagcaaggt
gaatctgaaactgaaaattcagctggccaacctaagcaaggtgaccttcatctttaccct
gtctctgtcaagacacaaggtggcgagaagctagaactacaattgaacccaggagattct
gttatggatataagacagtttctgcttgatgctcctgagacatgcttctttacatgctat
gacttgttgctacacaccaaagatggctcaacctatcatttggaagattttaatgaaatc
tctgaagttgctgacattactattggtggatgctccttggaaatggttccagctttatat
gatgatagatctataagggctcatgttcatcgtaccagagaattactttcactttccaca
cttcatgcgtcgctatcaacatcgcttgcattacaatatgagacagctcagaacaaagta
gcaactcctggagataccatcaaaactgaggtccctgagcttgatggtttgggttttatg
gaggatgttgctggtgcattgagtaatttgctctcatcaccctcaaatgagatcaaatgc
gtagagagtattgtgttttcatccttcaatcctccaccaagctatagaaggctggtcgga
gatttgatttatctggatgtcgtaacgttggagggtaataagctttgtattacggggact
acaaaaatgttttatgtcaattcaagctccgtaaataatacccttaatcccaggccaagc
aaaagttatccagaagcgaccacacttgtcgggattttgcaaaagatcagctctaagttc
caaaaagcttttcgtgaaattttggagcggagagcttctgcacatccttttgaaaacgtg
caatctctgttaccaccaaattcgtggttagggttacatccagttccagatcacaaacgt
gatgcagccagagcagaggatgcactgaccctctcttatggtagtgagctaattggtatg
caaagggattggaatgaggagttgcaatcttgtagggaatttccacatacaactcctcag
gaaagaattttgcgggatagggctctctacaaagtgacatcagacttcgtggatgcagca
atcagtggtgctgttggagttatcagcagatgcataccacctataaatccaactgatccc
gagtgcttccacatgtatgttcacaataacatcttcttcagtttcgctgttgatgcggat
cttgagcagctgtctaagaaccatatgtcagtttccaattcgaaaatggggagcaccggc
tctctaggcagttcttctgaaaagtctactggcagtttgttgcatagagagagtgaaatc
cccaatggggaaaaatgtgacgcgtcatgcgcaggggaatgccacgatgccatggaatca
gctgctgagacacaattgggtgagactgagcaggctacttatgcttctgcaaataatgat
ttgaaaggcaccaaggcataccaggaagctgatgtccctggactttataatcttgctatg
gccataattgattacagaggccatagagtagtagctcagagtgttttgccaggcattctt
caaggggataaatcagactctcttttatatggttctgttgataatgggaaaaagatatgc
tggaatgaggattttcattccaaggtggtggaggctgctaaacgccttcatttgaaagaa
cacacagtccttgatggatctggaaatgttttcaagttagctgcaccagttgaatgcaag
ggtattgttggtagtgatgacaggcattatcttcttgacttgatgagagtaactcctcgt
gatgcaaacttcactggatctgggtctcgattttgtatcttgagaccagaactaattact
tcctattgccaggtccttgatgcagagaaatcaaaatctaagtctaaatgtgaaggagag
gctcaggtcaccgctgatgggccaaacgataaccaggacatcgcagaaaaagagaagacc
attgatgcacaagaaattgtctcaccaccagctgaaagctctgaatcacgtgaggaaact
cttttcaaccctaatgtcttcactgagtttaagttggctggaaatgcggaggagatagca
acagatgaagaaaatgtgaggaaagccagtttgtatcttactgaggttgttcttccgaag
ttcatacaagatctttgcacacttgaagtatcacccatggatgggcagacactaactgaa
gcactccatgctcatggaattaatgttcgttatattggaaaagtggctgatgggaccagg
catttacctcatctttgggatctttgttctaatgagattgtggttagatcagccaagcac
attcttaaggatgtcttaagagatacagaggatcatgatattgggcctgcaatctgccat
ttcttcaactgttttttcggaagctatcaagctgttggctcaaaagtcgctgctaatagt
tctcagtctagaacccccaaaaaggaacaagcaggtcatcaatctccgggaaaacggtca
aagggacaaggaagatggaaggctggagcttctacaaggaagagtgtatcttcatatatg
catgttagctcagagactctatggtctgacattcaagaatttgccaaactcaaatatgag
tttgagttgccaaaggatgctaggatgcatgtaaagaaagattcggttatccgtaatctt
tgccaaaaggtgggcattacaattgcagctcgcagatatgatctgaaatctgcagcacct
tttgaaatatcagatatcttgaatcttcaacctgtagtgaaacactctgttcctgtttgt
tcagaagctaaggatcttgtggaaacagggaaaatccaattggctgagggaatgttgagt
gaagcctacacattattttccgaggccttttccatacttcagcaggttacaggcccaatg
catcgggaggttgctaactgctgtcggtatcttgcaatggttctgtatcatgctggagac
atggcgggagccataatgcaacagcacaaggagctaattataaacgagcgttgcctgggt
ttggaccaccctgacactgctcacagctatgggaatatggctcttttctatcatggactt
aaccaaacagaactcgccttacgacatatgtcccgggcgttgctcctgttaagtttgtca
tctggcccagatcatcctgatgtcgcagcaacattcattaatgttgctatgatgtaccag
gatcttgggaagatggacactgctcttcgatatttgcaagaggctttgaaaaagaatgaa
aggcttctgggcgaggaacatatccaaactgctgtatgctatcatgcacttgctattgca
tttaattgtatgggcgccttcaagctctcccaccagcatgagaagaaaacttatgatata
cttgtcaaacaactgggtgaggaggattcgaggacacgtgactctcaaaactggatgaag
acatttaagttgcgcgagcaacagatgaatgcacaaaagcaaaaaggtcaagctttgaat
gccgcttcagctcaaaaggcaatcgacatgttaaaggccaatcctgacttgatgcaggca
ttccaatctgctgctatagccggcgggtctgggagttccaacacttctgtcaacaaatct
cttaatgctgctgcaataatgggtgaaactcttccccgagggaggggagttgatgagagg
gctgcacgagcaacagccgaaatcaggaagaaggcagcagcgagaggcctcttaatacgt
caacatggtgttccggtccaagctttgcctccactgactcatctcctcaatatcatgagt
gcagcaggtggggccccagattcagtggaaaatggagaaaccactgcggcgaaggaaggc
aacaaccatccttcaaatggcccagcagatgcgaaaactaaccaaccatcattagagccg
gaaggtcaacctccagttgggttgggcagaggcttagctgcacttgatggcaagaaacaa
aagtcgaaagccaaagctgcatcgtga
DBGET
integrated database retrieval system
