Rosa chinensis (China rose): 112196728
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Entry
112196728 CDS
T06020
Name
(RefSeq) autophagy-related protein 11
KO
K08330
autophagy-related protein 11
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112196728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112196728
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112196728
Membrane trafficking [BR:
rcn04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
112196728
Mitophagy
Scaffold proteins
112196728
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112196728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
112196728
NCBI-ProteinID:
XP_024192903
LinkDB
All DBs
Position
4:complement(26228657..26235185)
Genome browser
AA seq
1144 aa
AA seq
DB search
MSSSITQGLVHQGKLLVHVAENGHSFELDCEETTPVEAVMRYIESVSDININDQLVLCSD
MKLEPQRPLSAYKLPADGEEVFIFNKARLQTHSSPPPLEHVDILDIAEPRSPSASHDRHP
LDDASDPALKALPSYEREFRFHYHKGHAIYSRTQVKYDNCERLLREQKVQQRAVEVAKGN
LDQYYRMINQNYTEFMKRYSQQHRIHSDLLVNLGRDVEKLRSIKLHPALQTANRKCLSDF
VKDENLRKVGENCTSSHKLFENKVSQFKQMFGEVKRRVEELFSNTAPLPIRDLELTIKEH
QRHINEQKSIMQSLSKDVNTVKKLVDDCLSSQLSSSLRPHDAVSALGPMYDVHDKNHLPR
MRACDNKISKLLEFCKDKKNKMNMFLHNYMQKITYISYIIKDAKLQFPVFREAMVRQDDL
FFEIKLVRGIGPAYRACLAEIVRRKASLKLYMGMAGQLAERLATKREAEVRRREEFLKVH
SSYIPRDVLASMGLYDTPNQCDVNIAPFDTGLLDVDISDLDRYAPDYLAGLSSKGSFRGS
YSMSNESSQSAEAEELTLDSLGKSEELIEGSELVEIAGTSKIEVENAKLKAELASAIAVI
CSFWPEVDFESLDDSKMDNLLKDAAEKTAEALHLKDEYGKHLQSMLRTKQLQCLSYEKRI
QELEQRLSDQYLQGQKLSNDEDASDFALLSDKVDNCKQEVLGRGDARVPCLSNSEPMDEV
SCISNSLDAKLGLFNAQTDKMRDGADENMMDSSAVHNHQMDSSMQELNREDLLVSGKDGK
EKMVGQLGMSLTHSSTAESMPEHLNVSPCETAADPGFGTKVSTELLLELETLLANKSNQL
NETEVKLKASMEDVAMLKRELDTNRKLLDESQMNCAHLENCLHEAREEAQTHLCAADRRA
SEYSALRASAVKMRGLFERLRSCVNAQGMTGFVESLRSLAQSLGNSINDNEDDGTLEFRK
CVRVLADRVGFLSRHREELLDKYPKVEAANEQLRKELEEKKDLVKTLYTKHQLEKQANKE
KISFGRLEVHEIAAFVLNTAGHYEAINRNCSNYYLSTESVALFTDHLPRQPNYIVGQIVH
IERQTVKPSAPISIRLEHELTSDTGTDRLALNSGSNPYGLPIGCEYFVVTVAMLPDTIHS
PPPS
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagtatcacccaaggcttggttcatcagggcaagcttttggttcatgttgct
gagaatgggcactcatttgagcttgattgtgaagaaaccacaccggtagaggcggttatg
cgctatatcgaatcagtctctgatattaatatcaatgaccagctcgttctgtgttccgat
atgaagcttgagccgcagcgcccgctctctgcttataagcttccagctgatggagaggaa
gtgtttatattcaataaagcgaggctgcagacacattcatccccgcctccgcttgagcat
gttgatattcttgacatcgccgaacctcgatcaccctcggcttcacacgatcgtcatcct
ttggacgatgcctcagatcctgctttgaaagccttgccttcttatgaaagggaatttagg
tttcattaccacaagggtcatgcgatttacagtcgaacccaagtgaaatatgacaattgc
gagaggcttttgagggagcaaaaggttcaacagagggcggtggaggttgccaagggtaat
ttggatcaatactataggatgataaaccagaactatacagaattcatgaagcgatattca
cagcagcatcgaattcattctgatcttttggtgaatctggggagggatgtggaaaaactg
agatccatcaagcttcatcctgcgttacaaactgccaaccgtaaatgcttgtcggatttt
gtaaaggacgagaacctgaggaaagtgggggagaattgtacgagttcccataaactgttt
gagaataaggtttcacagttcaagcagatgtttggtgaggtgaagcggagagttgaggaa
ttgttttctaacacggcacctctgcctattagggatttggaactgacaattaaggagcac
caacgacatattaacgagcagaagagtataatgcagtcattgagcaaagatgtaaatact
gtcaagaaacttgtggatgattgcttgtcttcccagttgtcttcctcacttcgtcctcat
gatgcggtttcagccttgggccctatgtatgatgtccatgacaaaaatcacctgcctagg
atgcgggcttgtgataataaaatttccaagctacttgaattttgcaaggataaaaagaat
aaaatgaacatgtttcttcataattatatgcaaaagataacatacatctcttatatcatc
aaagatgcaaagctacagtttcctgtttttagagaggcaatggtgcgccaggatgatttg
ttttttgaaattaagttggttcgcgggattggcccagcatatagagcctgcctagcagaa
atagtaagaagaaaggcttccctaaagctctacatgggcatggctggacagttagctgag
aggcttgcaacaaagagggaggctgaggtcaggagacgggaggagtttttgaaagttcat
agttcatacatacccagggatgtattagcatccatgggtttatatgatacccccaatcag
tgtgatgtcaatatagctccttttgatactggtttgcttgatgttgacatttcagacctg
gaccgttatgcacctgattacttggcaggactgtcttctaagggttcttttagaggttca
tattctatgtctaatgaaagcagtcaatcagcagaggctgaggagcttacattggatagc
cttgggaaatctgaggagctaattgaaggcagtgaattggtagagattgctggaactagt
aagatagaagttgagaatgcaaaattgaaagctgaactggcttctgcaatagctgtgatt
tgttcattctggcctgaagtagactttgaatcattggatgacagtaaaatggataattta
ttgaaggatgctgcagagaaaacagctgaagccttgcacctgaaagatgagtatggaaag
catttgcaatctatgcttaggacgaagcagctgcagtgtctttcgtatgagaaacgcatt
caagaattggaacagagactatctgatcagtatttgcaaggtcagaagctttcaaatgat
gaggatgcctctgattttgcccttttgtctgataaggttgataactgcaagcaagaagtc
ttaggtagaggagatgcccgtgtgccttgcttatctaattctgagcccatggatgaggtt
tcctgcatctcaaattctttggatgccaaattgggtcttttcaatgcacaaactgataaa
atgcgagatggggctgatgaaaatatgatggactcttctgccgtacataatcatcaaatg
gattcatcaatgcaagagctaaatcgtgaagatctgctagtcagtggtaaagatggaaaa
gaaaaaatggtggggcagctgggcatgtcactgacacacagttctactgctgaaagcatg
cctgaacatctgaatgtgtctccttgcgaaacagcagctgacccaggctttggcaccaag
gtcagtactgagctgttgttggaattggaaactctacttgcaaacaagtcaaaccagttg
aatgaaacagaggtcaagcttaaagcttctatggaggatgttgccatgcttaagagggaa
ttggacacaaataggaagctccttgatgaatctcagatgaattgtgctcacttggagaac
tgtttgcatgaagcaagagaggaagctcaaacccatctttgtgctgctgatcgtagggcc
tcagagtacagtgcactgcgagcatctgctgtgaaaatgcgtggcctttttgaaaggctt
cggagctgtgttaatgcccagggaatgactggttttgttgagtctttgcgcagtttagca
caatctctgggaaattctatcaatgacaatgaagatgatggtactcttgagtttcggaag
tgtgtccgggtcctcgcagatagagttggtttcttgtcaaggcaccgtgaagaactgctt
gacaagtatccgaaggttgaagcggcaaatgaacaacttagaaaagaattggaagagaag
aaagatctggttaaaacattgtacacaaagcatcaactcgagaaacaggcaaacaaggag
aagatatcttttggccgtttggaagtccatgagatagccgcatttgttctcaacactgct
gggcattacgaggcaatcaatagaaattgctctaactattatctctctactgaatctgtt
gccttatttacagatcatctcccgcgtcaacctaactacattgttggacaaattgtgcat
attgaacgccagactgtgaagccatcagctcctatttcaattcggcttgagcatgagcta
acatctgacacagggactgaccggttggccttgaattcaggatcaaacccatatggtctc
cctattggctgtgaatacttcgtcgtgacagtagccatgttacctgataccattcattca
ccacctccttcctga
DBGET
integrated database retrieval system
