Rosa chinensis (China rose): 112196755
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Entry
112196755 CDS
T06020
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04120
Ubiquitin mediated proteolysis
rcn04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112196755
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112196755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112196755
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112196755
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112196755
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112196755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_DCAF4
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_like
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
112196755
NCBI-ProteinID:
XP_024192945
LinkDB
All DBs
Position
1:64196899..64198668
Genome browser
AA seq
427 aa
AA seq
DB search
MLGYGSLWLVQKHPQCLQNLTSPPPPPLNHDWTMNPPFHFPVPQPFQNQNQTQNPDQQQV
QDNKPTADDHHLHKSRFEWDFTLSTVVSSPTSTGAVSNTLGVIEFDPSETVLATGGIARK
IRIYSVKSLLPSHEQPKDDVVSLDHAAACDYYICTPAKLSSLRWRPGSSGRVLGSGDYDG
VVTEYDLESHLPIFERDEHGGRRVWSLDYSDSDPVLGASGSDDGTLQMWDPRCEGGDCVA
RVAPSESGNPVCCVEFNPFGGPLLAVGCADRKAYVYDVRRMAGPVLSFDGHDKTVTYVRF
LNGRSMVSAGTDGCLKMWSVDDAREIRTYSGHTNNRSFVGLSVWRNGGLLGCGSENNQVF
VYDVRWGEPVWVHGFGPMGSEGCDDRGFVSSVCWRQMGGEEQCTLMAGGSDGVLQLFVGR
RKSLASD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctagggtacgggagcctttggttggtacagaaacacccccaatgcctccaaaactta
acatctccaccaccaccgccccttaaccatgactggacgatgaacccaccattccatttc
ccagtcccacaaccattccaaaaccagaaccaaacccaaaacccagaccaacaacaagtt
caagataacaaacccaccgccgatgatcatcatcttcataagtccaggttcgaatgggac
ttcactctctccacggtcgtctcctcccccacctccaccggcgccgtctccaacactctc
ggagtaatcgagttcgacccatcggaaactgttctagccaccggaggcatagccaggaag
attagaatctacagcgtcaagtctctcctgccgagtcatgaacagcctaaggacgacgtc
gtttcgctagaccacgctgctgcatgcgactattacatttgcacccccgccaagctcagc
agcctccgctggcggcccgggtcgagcggccgggtcctcgggtctggggactacgacggc
gtcgtcacggagtacgatctcgagtcccacctccccatcttcgagcgcgacgagcacggc
gggcgccgggtctggagcctcgactactcggattcggatccggttctcggggcgtccgga
tccgacgacgggacccttcaaatgtgggacccgcggtgcgagggcggggactgtgtggct
agagtggctccttccgaatcgggtaacccggtctgttgcgtggagttcaatcccttcggt
gggccgctcctggccgtcggatgcgctgaccggaaagcctacgtctacgatgtgaggaga
atggcgggcccggttttgagttttgacggccacgataagaccgtgacgtacgtcaggttc
cttaacggccgttcgatggtgtcagcgggaacagacgggtgtctgaagatgtggagcgtg
gatgacgcgcgggaaattcggacgtattcgggccacaccaacaatcggagctttgtcggg
ttgtcggtttggagaaacggtgggcttctcgggtgcgggtcggaaaataatcaggtattt
gtgtatgatgttaggtggggtgagcctgtttgggtgcatgggtttggaccaatgggaagc
gagggttgtgatgaccgtgggtttgtgagcagtgtgtgctggcggcagatgggcggtgag
gaacagtgcaccctcatggcgggtggatccgatggggttttgcagctttttgtgggtaga
agaaagtcattagcttcggattag
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