Rosa chinensis (China rose): 112196956
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Entry
112196956 CDS
T06020
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112196956
Enzymes [BR:
rcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
112196956
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112196956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
AIRS_C
Motif
Other DBs
NCBI-GeneID:
112196956
NCBI-ProteinID:
XP_024193227
LinkDB
All DBs
Position
4:31460249..31466069
Genome browser
AA seq
664 aa
AA seq
DB search
MGTSALSKRRGAKPQKASPNKKQKKEPFTAKNPKKPKIVQVPEPSDEEEEEEDLEEFDVG
DEEGSGSDGDSDIFGGDDPLQDDDDDDDDSLPGSDEDKDEDEEKGSSDSDSDSDSGDIEK
KSRLIDRKTLEEEEEGRKELELNIKDESDEFRLPTKQELEQEAHQPPDLSHLQRRMKEIV
RVLSNFKALRQEGASRKDYVEQLKRDLSSYYGYNDFLIGALVEMFPVVELVELIEAFEKP
RPICLRTNTLKTRRRDLAASLINRGVNLDPLSKWSKVGLVVYESQVPVGATPEYMAGYYM
LQSASSFLPVMALAPQENERVVDMAAAPGGKTTYVAALMKNSGIIFANEMKEPRLKSLTA
NLHRMGVTNTVVCNYDGKELPKVLGSNAVDRVLLDAPCSGTGVISKDESVKTSKSSDEIQ
KCAHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALRKRNVKLVPCGLD
FGRPGFTRFREQRFHPSVEKTRRFYPHVHNMDGFFVAKLKKMSNLKPTTAESRLSETIEA
ETVDVDLNMTEDDSEKNARVDVQQHSADEDTESEKKVLEDGKPELAGTGKKRKEKKLPSF
FSHLKGQFPLDQKDEKKVQSSDQKKEKRVKLKFPPREEIAKAREEKRTALRKSKAKNNTV
GTGE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgggcacctctgcgcttagtaagagaaggggggcaaaaccccagaaggcttcgcccaac
aagaagcaaaagaaggagcctttcaccgccaaaaacccaaagaagcccaagattgttcaa
gttcccgaaccttctgacgaagaagaggaagaagaagaccttgaagagtttgatgtagga
gatgaggaaggatctggttcagatggtgactctgatatttttggtggcgatgatcccctc
caagatgatgatgatgatgacgacgactccctcccaggaagtgatgaagataaagacgaa
gatgaagagaaaggttcttcggattcggattcggattccgactcaggtgatatagagaag
aaatcaaggctcattgaccgaaaaacgctggaggaggaagaagaaggtagaaaggaactg
gaattaaatatcaaggatgaatctgatgagttcagattaccaactaagcaggaactcgaa
caagaggcgcatcaacctcctgatctttcacaccttcagaggaggatgaaagagattgtt
cgagtgctctcaaatttcaaggcattgaggcaagagggggcgtcaaggaaggattatgta
gaacagcttaagagagatttaagctcatactatggctacaatgactttttgattggagct
ttagtagagatgtttccagttgtggaacttgtggagctcattgaagcttttgaaaagcct
cgacctatatgcctccgaactaacactctaaagacacgaaggagggatttggcagctagt
ttgataaacagaggagtaaacctagatcccttaagcaagtggtcaaaagttggactggtt
gtgtatgaatcacaagtcccagttggtgccactcctgaatatatggctggttattacatg
ctccaaagtgcaagctcctttttgcccgttatggcccttgctcctcaagaaaatgaacga
gttgttgatatggcggctgctcctggtggtaaaacaacctatgtagcggctcttatgaaa
aatagtggaattatatttgcaaatgaaatgaaggagccaaggctcaagtccctcactgct
aatttgcatcgtatgggggtgacaaacacagtcgtttgtaactatgacggcaaggagctc
cctaaggttctgggtagcaatgcagttgatagagttctgttagatgctccttgcagcggg
acaggggttatatccaaagatgagtctgttaaaacttctaaaagttctgatgaaatacag
aaatgtgctcatctccagaagcaattgatactagctgcaattgacatggtggatgcgaat
tcgaaatcagggggatacattgtgtactccacgtgctccattatggttgctgagaatgaa
gctgttattgactatgcactcaggaagagaaatgttaaacttgttccctgcggacttgac
tttgggcgtccagggtttacccggtttagggaacagcgcttccatccatcagtggaaaag
acgaggcggttctaccctcatgttcataatatggatggtttttttgtggcaaagctgaaa
aagatgagcaatttgaagccaactacagcagaatctcgactatctgaaacaatagaggct
gaaacagtagacgtagatctcaacatgacagaagacgacagtgaaaagaatgccagagta
gatgttcagcagcattcggcagatgaggacacagaaagtgaaaagaaggttttggaagat
gggaaaccagaattggcaggcactgggaaaaagaggaaagaaaagaagctcccttccttt
ttctctcatctgaaagggcaattccccttggatcaaaaagatgaaaagaaagtgcaatcc
tcggaccaaaaaaaggaaaagagagtgaaactgaaatttcctcctagggaggagattgca
aaagccagggaagagaagaggacagctctgaggaaaagcaaagctaagaacaataccgtt
ggtacaggagaatga
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